| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4988 |
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| Symbol | |
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| ID | 4041850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1664505 |
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| End bp | 1665317 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637980409 |
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| Product | NLPA lipoprotein |
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| Protein accession | YP_587119 |
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| Protein GI | 94313910 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
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| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.563314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.330855 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGG GCAAGGGACT ACGTCTGTTC ACCGCGCTGC TTGCGGTAAC GGTGATGCAG
GCTGCAGGAG CAGCGGACCC CGACAAGAAG GAGATCCGCT TCGGCGCCAC CGCCGGCCCC
TATGCCGACC AGATCCGCTA CGGGGTCAAG CCGATCCTCG AGCAGCAGGG CTACAAAGTC
ACCATCATCG AGTTCAGCGA CTACGTCCAA CCGAATCTGG CGCTGGCCGA CGGCGCCATC
GACGCCAATG CGTTCCAGCA TGTGGTCTAT CTGAAAAAAT TCTCGAGCGA CCGCAAGCTG
GCGCTCTCCG AGATCGTCCA GGTTCCCACC GCGCCGATCG GCATCTATAG CCGCAAGCAC
AAGTCGCTGG CCGAGGTGAA GACCGGCGCC ACCGTATCGC TGCCCAATGA CCCCACCAAC
CTGGCGCGGG CCATCGCGAT CCTGCAGCAG ATCGGCTGGG TCACGCTCAA ACCCGGCACC
GATGCCGTGC GCGCCTCCGA GCGCGACATC GACGGTAACC CGCACAAGCT TAAGCTGATT
CAACTGGAAG CAGCGCAACT GCCGCGCTCG CTGGACGATG TGGACTATGC CTTCGTGAAC
GGGAATTTCG CGCTGGCCGC CGGCCTGAAA CTCACCACCG CGCTGGCGCT TGAAAAGATT
CCGGACTACT ACATGAACCT GGTCGCCGTC AGGACCAGCG ATCTGAACCG GCCTTATGTC
GCGGACATTC GCGAGGCCTA TCGTTCACAG GCATTCAAGC AGGTTACGCA GCAACGGTTC
GCGGGATTCG TTGCGCCGGC ATATCAACGT TGA
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| Protein sequence | MKLGKGLRLF TALLAVTVMQ AAGAADPDKK EIRFGATAGP YADQIRYGVK PILEQQGYKV
TIIEFSDYVQ PNLALADGAI DANAFQHVVY LKKFSSDRKL ALSEIVQVPT APIGIYSRKH
KSLAEVKTGA TVSLPNDPTN LARAIAILQQ IGWVTLKPGT DAVRASERDI DGNPHKLKLI
QLEAAQLPRS LDDVDYAFVN GNFALAAGLK LTTALALEKI PDYYMNLVAV RTSDLNRPYV
ADIREAYRSQ AFKQVTQQRF AGFVAPAYQR
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