| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4985 |
|---|
| Symbol | |
|---|
| ID | 4041847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 1659955 |
|---|
| End bp | 1661262 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637980406 |
|---|
| Product | sodium/hydrogen exchanger |
|---|
| Protein accession | YP_587116 |
|---|
| Protein GI | 94313907 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0820317 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.370325 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGACGTTG CCATTGAACT GACTACGCGA GTCGGCGTGC TGCTGTTCTT CATCGCCATT
TGCCATGTCA TCGCACAACG TGTGCGGTTG CCCGACCCGA TCATCCTGAC CGCCGCCGGC
GTCACTATCG GCTTCGGCTA TGTGGCGCTA GAGCATGTCG CGCCCGCATT CGCAGCGAAT
ACTATCGCGC CGTTCCTGTC GCCGGCCATG CCGCCCGAGG CCTATCTCTG GATCTTCCTG
CCGCCAATCC TGTTTCAGGC GGCAATCGAG GTCGATAGTT CAGGGTTCGT CGCCGACCTC
GGCCCAATCC TGCTGCTGGC CATCGGCGCC GTGGTCGCGG CAACGCTGAG CGTCGGCGCG
GTGGCTTACC TGACCAGCGG GCAGGGACTG ATCGCCTGCC TCTTGCTCGG TGCGATCGTC
AGCACCACCG ATCCGTCCAC GGTCATCGGC CTGTTCCAGA GCAGTGGCGC GCCGGCGCGG
CTGATTCGGC TGGTCGAAGG CGAGAGCCTG TTCAACGATG CCGCCGCGAT TGCGATCACA
ACCTTGCTGA CGGGCGTGAT TTCGGTCATG CCGACACACG ATGCCGCGCA TTTTCCGCTG
GCCCAGTTTC TTCTCTCGCT GCTTGGCGGT TGCGCGGTCG GCTGGCTCGT GGGCGTGGTG
TTGGTGTTCG TGTCGGGCGC GATGCGCAGC CCGCCGTTCG CCGAGTACTC GCTATCGCTC
GCGTTGCCTA ACCTGATCTA TCCGTTCGCG GAGCGCGTGC TGCATGTGTC GGGCGTGGCG
GCGGTGGTGT GCGCGGGGCT CGTGGTCGGG CGGATCATGC TTTCGCGGCG CCCTGCATCG
CACGTCAAGC TGTTTCGCCA GTTGTGGCTC TATCAGGCCA CTATTGCCAG CGCCAGCGTG
TTGCTGCTGG CGACAGCACA CGTGCCGTCG CTGCTCGACG ACCTGCGCAT GATCGACGTC
GTCATCCTGC TGCTCGTGCT GGTCGCGGCG GTGGCGAGCC GGTTCGGCAT CTTGTCCGTG
AGCATGCCGA TGATGAGCCG GATTGGCATC TGCAAACCGT TGCCGGTCTC GCACCAGTTG
CTGATTGCCT GGGGTGGCGT GCGTGGTCCC GTGACGCTGA CACTGGCCAT CTGCCTGGCC
CGGAATCAGG ACCTGGCGCC AGACACCCGT CATTTCGCGG CGGCCATGGC AGCGGGCTTC
GTGCTGCTGA ACCTGTTCTT CAACGGGCTG ACGCTCAAGC TCTTCGCCCG TTGGCTCGGT
GTGGCGGCGC CGGGTGGGCG AAGGCCGGCC GCGATCGAAG TCGATTGA
|
|---|
| Protein sequence | MDVAIELTTR VGVLLFFIAI CHVIAQRVRL PDPIILTAAG VTIGFGYVAL EHVAPAFAAN
TIAPFLSPAM PPEAYLWIFL PPILFQAAIE VDSSGFVADL GPILLLAIGA VVAATLSVGA
VAYLTSGQGL IACLLLGAIV STTDPSTVIG LFQSSGAPAR LIRLVEGESL FNDAAAIAIT
TLLTGVISVM PTHDAAHFPL AQFLLSLLGG CAVGWLVGVV LVFVSGAMRS PPFAEYSLSL
ALPNLIYPFA ERVLHVSGVA AVVCAGLVVG RIMLSRRPAS HVKLFRQLWL YQATIASASV
LLLATAHVPS LLDDLRMIDV VILLLVLVAA VASRFGILSV SMPMMSRIGI CKPLPVSHQL
LIAWGGVRGP VTLTLAICLA RNQDLAPDTR HFAAAMAAGF VLLNLFFNGL TLKLFARWLG
VAAPGGRRPA AIEVD
|
|---|
| |