Gene Rmet_4984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4984 
Symbol 
ID4041846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1659181 
End bp1659948 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content66% 
IMG OID637980405 
Producthypothetical protein 
Protein accessionYP_587115 
Protein GI94313906 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.123849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.35217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGTCGT CTTCTGAAAA TGACAGCTAT CTCCGTCCCG GCAGAATCAG CCGGCGGCAA 
CTGGCGCTGG CAGTCGCTGG CGGCCTGGCC ATCGTCGCCA ACTGGCTGTT GCTGTTCTCG
GCCTACTCCG GCGCGTCTAT TTCCATCGCC ACGGCGGTCT ACAACACGCA GCCGTTCATG
CTCGTTGGCC TCGGCGCATT GTTCCTTGGC GAGCGCCTGA CGCTCGCCAG GTTCGGATGG
CTCGTGCTGG CGTTCGGCGG CATGCTGCTG ATCGTGCGTG CGGGGCCCGA TGCCGGCGCC
ATGGATGGGC GCTATCTGGT CGGGATCCTG CTGGCACTGG GCGCCGCGTT CTGCTACGCG
CTGGCCGCGC TGATCGCCAA GAAGCTCAAG GATGTCCCGC CGCACCTGAT CGCGCTGATT
CACGTGATCG TCGGCACGGT GACGCTGCTC CCGATGAGCC TGCAAGCGGA CTGGCCCACC
GGCGCCGCAA CATGGACGAC GCTGGTCACG CTCGGCTTCG TGCATACCGG CGTGATGTAC
ATCCTGCTGT ATGGCGCCAT CCAGAAACTG TCCACCTCGC TGACCGGCGC GTTGTCGTTC
ATCTATCCGA TCGTGGCCAT CCTGGTGGAC CGGCTCGCGT TCGGCCATCA CCTGCACCCG
TCGCAGATCG CCGGCGCCAC GCTGATCCTG CTGGCCGCCG CGGGCATGAC GATGGGATGG
TCGTGGCGCA AGCGCCTGCC GTCGGCCGCG CGCAAGCCGT CCGCCTGA
 
Protein sequence
MQSSSENDSY LRPGRISRRQ LALAVAGGLA IVANWLLLFS AYSGASISIA TAVYNTQPFM 
LVGLGALFLG ERLTLARFGW LVLAFGGMLL IVRAGPDAGA MDGRYLVGIL LALGAAFCYA
LAALIAKKLK DVPPHLIALI HVIVGTVTLL PMSLQADWPT GAATWTTLVT LGFVHTGVMY
ILLYGAIQKL STSLTGALSF IYPIVAILVD RLAFGHHLHP SQIAGATLIL LAAAGMTMGW
SWRKRLPSAA RKPSA