| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4971 |
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| Symbol | |
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| ID | 4041833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1645470 |
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| End bp | 1648928 |
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| Gene Length | 3459 bp |
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| Protein Length | 1152 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637980392 |
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| Product | putative carbamoyl-phosphate synthase L chain, ATP-binding |
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| Protein accession | YP_587102 |
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| Protein GI | 94313893 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG1038] Pyruvate carboxylase
[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.266349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.508617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACACGA GTATTGAGCA TAGACGAGTT TCGTGCAGAG GAGTCCTGAT ATCTGGCTGT
CAGGAGCCGT ATGCACAAGA GGCTTCAAAC CGCGCTGAAT GGTGCAGTCG TCTTCTGAAA
ATGACAACTG AATTGAAGAA GCTGTTGATC GCCAACCGCG GAGAGATTGC ATTGCGCGTC
CAGCGCGCCG CACGCGACCT GGATATTGGC ACCGTCGCGG TGTACTCGCA GGACGACGCG
GGCTGCCGCC ATCGGATGCT GGCCGACGAA GCGATTGCGC TGGACGGTGC GGGCCCTGCT
GCGTACATCG ACATCGCGGG AATCATCGCT GCCGCGAAGG CATCGGGCAG CGATGCCGTA
CACCCGGGCT ACGGCTTTCT GAGTGAGCGG GCCGATTTTG CGCAGGCGTG CATCGATGCC
GGCATCCGGT TCATCGGACC GACGGTCGAG CATCTCGCGC TGTTCGGCGA CAAGGGCCGC
GCGCTGCAAT TGGCGGCCGA GTGCGACGTG CCGGTCATGC CCGCCACGCA TGGCGGCGCG
TCCCTGGAGG AGATCGAACG CTTCTTCGAT GCACAGGGCG ACGCCGGCAT TGTCATCAAG
GCGGTTGGCG GTGGCGGCGG GCGCGGCATG CGCGTGGTGC GCAGACGCGA GGATCTGGCG
GAGGCCTATG CGCGCTGCCG GTCCGAGGCC AGTTCCGCGT TTGGCGTGGA TGCGCTGTAC
GCCGAGCGGC TGGTCAGCCG GGCACGCCAT ATCGAAGTGC AGATCGCTGG CGACGGCCAG
CACGTTATTG CGCTGGGCGA GCGGGACTGC ACGCTGCAGC GCCGTTTCCA GAAACTGGTG
GAGATTGCCC CGAGCCCGGT GCTCAAGCCG GAGCTGCGCG CGGAGATTAT CAAGGCCGCG
CTGCGGCTGG CGCGTCGCGT CAACTACCAG AGCCTGGGCA CGTTCGAATT TCTGGTCGAG
GAAAGCGAGT CGGGCGAGCA GAAGCGCTTC GTCTTTATCG AAGCCAATCC CCGGCTGCAG
GTGGAGCACA CCATCACCGA GCAGGTGACC GGCGTGGATC TCGTGGCGCT GCAGATCGGG
CTGGCCTCCG GGCGGACGCT CGTCGAACTT GGGCTCGATC CGGCTTCGCC GCCGCAACCC
CGGGGCTATG CGATCCAGGT GCGCGTCAAT GCCGAAATGA CCGATGCGCA AGGGCTTGCG
CGTCCGGCAT TTGGCCGTCT GGAGCGCTTC GAGCCGCCCG CCGGTCCGGA TGTGCGGGTG
GACTCCCACG GCTACGCCGG CTACGAGCCG TCGCCGAACT TCGACACCCT GCTGGCCAAG
CTGATCGTAA GCAGCGCCGC ACCCGGGTTC GAAGCTGCCG TGCGCCGGCT GCAGCGCAGT
CTCGCGGAAT TCCGCATCGT TGGCGTGCCG ACCAACCTCA ACCTGTTGCG GGCGCTTGCC
CAACGCGAGG ACTTCCTGAC GCAGGACGTC CACACGCGTC TTTTCGAGTC GATCCTGCCG
GCGCTGATGG CGTCGGCGGA AACCATCGCC GAAGCCGAGC GCGCGCAGGA CGCGCGTTTC
GGCGGCGCAT CCCATGCAAC GCCCGTCCAC GCGAGCCACG CGACCCGCGC GCCGGAGGCT
GAAGAGGAAC TGGAAGAAGG GCTCGTGGCG ATCCGCGCGC CGCTGACTGG CCGCGTGGTC
GACATCCCGG TGCAACTGGA CGAGATCGTC AAGCCTGGGC AGACGGTGGC CGTGCTAGAT
GCGATGAAGA TGGAGCATGC GATTGTCGCG CCGTGCGCGG GCCGTGTGGT CGATCTGCGC
CCGGAGAAGG GTGCGCTGGT GTCCGAAGGC CACATGCTGA TCGTGCTCGA GCAGGCAGAG
GCCGACGGCG TGGCCGTGGA TGCCGCGCGG AATGTCGATC CGAATGCGAT CCGTGCGGAT
CTGCAGCGTG TGCTGGACCG GCACGCCTAT CTGTATGACG CGGCGCGTCC CGATGCGGTG
GCCAAACGCC GTTCGCGCGG GCAGCGCACG GCGCGGGAGA ACATCGCCGA CCTGTGCGAT
GGCGACTCCT TCGTGGAATA TGGCGCGCTC GCGCTGGCCG CGCAGGCATC CCGCCGCAGC
AAGGAAGACC TGATCGTCAA CACGCCCGCG GATGGCCTGA TCACCGGTAT CGGCGAGATC
AACCGGGAAC TGGTCGCGAA GGAACGGGCG CGCAGCGCGG TGATGGCGTA CGACGCCACG
GTGCTGGCCG GCACGCAGGG CAAGCGCAAT CACATCAAGA CGGACCGCAT CGTCGAGGTG
GCGCTCCGTG ACGAACTGCC GCTCGTGCTG TTTGCCGAAG GCGGCGGCGG GCGGCCTGGT
GACGTGGATT TTCCGTCCGT CTCCGGCCTG TATCAGCCGT CGTTCGCGGC GTTTGCCGAA
CTCAGCGGAC ACGTGCCGGT GGTCGGCATC GTGTCGGGCC GTTGCTTTGC CGGCAATGCC
GCGTTCCTGG GCTGCTGCGA CGTGATCATT GCCGATCGCT CGGCGAACAT CGGCATGGCC
GGGCCGGCCA TGATCGAGGG CGGTGGCCTT GGCATCTTCC GTCCGGAAGA CGTGGGTCCC
GCGTCGGTGC AGTTCGCCAA TGGCGTGGTC GACGTGCTGG TCGAGAATGA GGCCGAGGCC
GTGGTGGTCG CCAAGCACTA CCTGTCGATG TTCCAGGGCC GCGTGACGCA CTGGAGCGCG
CCTGACGCGC TGGCGTTGCG CCAGGTCGTG CCCGAGAACC GCCTGCGCGT GTACGACACC
CGCAAGGCCA TCGAAGGCAT CGCCGACGTC GGCAGCGTGC TGATGCTGCG CGGCGGGTTC
GGCGCGGGCA TTCACACCGC ACTGGCCCGT GTGGAGGGGC AGCCGGTCGG CATCATGGCC
AACAACCCGT ATCACCTTGG TGGCGCGATC GACGCGGATG CCGCGGACAA GGCAACGCGT
TTCATGCAAC TCTGCGATGC GCATGGCTTG CCGATCATCT CGCTGATTGA TACCCCGGGG
TTCATGGTCG GACCCGAGAT CGAGGCCCAG GCCCAGGTGC GTCACGTGTC GCGGATGTTC
CTGGCTGCTG CCAAGCTGCG CGTGGCGCTG CTGGCCGTCA CGCTGCGCAA GGGCTACGGC
CTCGGCGCGA TGGCGATGGC AGGCGGTGGC TTCCGCTCGG CAAACTTCAC GATCTCGTGG
CCGACCGGCG AATTCGGTCC GATGGGGCTG GAGGGCGCGG TCAGGCTCGG CTTCAAGAAG
GAACTCGAAG CGGTGCCCGA TGGCCCGGAG CGCAAGGCGC TGTTCGACAA ACTGGTGGCG
CAGTCCTACG AGCGTGGCCA CGCGATCAAC ACGGCCGCTG CAGTGGAGAT CGATGCCGTG
ATCGACCCGG CCGAGACGCG CAAATGGATC GCCCAGGGCA TTGCCTCGGC CGACGTTCGC
AGCCGCAGGG CGCGCCAGTC GTTCGTCGAT GCATGGTGA
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| Protein sequence | MHTSIEHRRV SCRGVLISGC QEPYAQEASN RAEWCSRLLK MTTELKKLLI ANRGEIALRV
QRAARDLDIG TVAVYSQDDA GCRHRMLADE AIALDGAGPA AYIDIAGIIA AAKASGSDAV
HPGYGFLSER ADFAQACIDA GIRFIGPTVE HLALFGDKGR ALQLAAECDV PVMPATHGGA
SLEEIERFFD AQGDAGIVIK AVGGGGGRGM RVVRRREDLA EAYARCRSEA SSAFGVDALY
AERLVSRARH IEVQIAGDGQ HVIALGERDC TLQRRFQKLV EIAPSPVLKP ELRAEIIKAA
LRLARRVNYQ SLGTFEFLVE ESESGEQKRF VFIEANPRLQ VEHTITEQVT GVDLVALQIG
LASGRTLVEL GLDPASPPQP RGYAIQVRVN AEMTDAQGLA RPAFGRLERF EPPAGPDVRV
DSHGYAGYEP SPNFDTLLAK LIVSSAAPGF EAAVRRLQRS LAEFRIVGVP TNLNLLRALA
QREDFLTQDV HTRLFESILP ALMASAETIA EAERAQDARF GGASHATPVH ASHATRAPEA
EEELEEGLVA IRAPLTGRVV DIPVQLDEIV KPGQTVAVLD AMKMEHAIVA PCAGRVVDLR
PEKGALVSEG HMLIVLEQAE ADGVAVDAAR NVDPNAIRAD LQRVLDRHAY LYDAARPDAV
AKRRSRGQRT ARENIADLCD GDSFVEYGAL ALAAQASRRS KEDLIVNTPA DGLITGIGEI
NRELVAKERA RSAVMAYDAT VLAGTQGKRN HIKTDRIVEV ALRDELPLVL FAEGGGGRPG
DVDFPSVSGL YQPSFAAFAE LSGHVPVVGI VSGRCFAGNA AFLGCCDVII ADRSANIGMA
GPAMIEGGGL GIFRPEDVGP ASVQFANGVV DVLVENEAEA VVVAKHYLSM FQGRVTHWSA
PDALALRQVV PENRLRVYDT RKAIEGIADV GSVLMLRGGF GAGIHTALAR VEGQPVGIMA
NNPYHLGGAI DADAADKATR FMQLCDAHGL PIISLIDTPG FMVGPEIEAQ AQVRHVSRMF
LAAAKLRVAL LAVTLRKGYG LGAMAMAGGG FRSANFTISW PTGEFGPMGL EGAVRLGFKK
ELEAVPDGPE RKALFDKLVA QSYERGHAIN TAAAVEIDAV IDPAETRKWI AQGIASADVR
SRRARQSFVD AW
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