| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4961 |
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| Symbol | fimA |
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| ID | 4041823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1629707 |
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| End bp | 1630261 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637980382 |
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| Product | fimbrial protein |
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| Protein accession | YP_587092 |
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| Protein GI | 94313883 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0180304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.126986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACCA AGCTTATTTC CGCCACGATC GTAGCCATCG CCGCCATGGG TGCCCAACTC
GCCCATGCCG CGCCGGACGG CACTATCACG TTCAACGGCA ACATCACCGC CACGACCTGC
AAGATCAACG GTGGCACCGC GCCGGTGAAC TTCACGGTCA CGATGCCGAC CGTTTCGACG
ACCACGCTGA ACGCCCTGGA CGCGACCGCC GGCCGCACGG GCTTCCGGAT TGCGCTGACG
AACTGCACGC CGGCCACGGG CAACGTCCAC ACGTTCTTCG AGGCAGGTTC CACCGTCAAT
CTGGGCACTG GTCGACTGAT CAACGCTGGC TCGGCCACGG CAGTCGAAAT CGAACTGCTG
AACAAGGACA CCTCGGTCAT CACCGTGGGT GCCTCGGATG GCGTTGGTGC CGGTCTGCAG
AACTCGAAGT CGGTGCCGAT CACCGCTGGC GCCGCCAATC TGGACTACTA CGCGCAGTAT
CACTCGACCT CGGCCGCCGG CTCGGGTGCG GGCGCCGTCA GCTCGACGGT GACGTACGAC
ATTTCCTACA ACTAA
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| Protein sequence | MKTKLISATI VAIAAMGAQL AHAAPDGTIT FNGNITATTC KINGGTAPVN FTVTMPTVST
TTLNALDATA GRTGFRIALT NCTPATGNVH TFFEAGSTVN LGTGRLINAG SATAVEIELL
NKDTSVITVG ASDGVGAGLQ NSKSVPITAG AANLDYYAQY HSTSAAGSGA GAVSSTVTYD
ISYN
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