Gene Rmet_4953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4953 
Symbol 
ID4041815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1618215 
End bp1619237 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content66% 
IMG OID637980374 
Producthypothetical protein 
Protein accessionYP_587084 
Protein GI94313875 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.682064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTT CGCGCTGGAA GCAGCGGCCT GCTGCATCGA ACTGGGGCGA TTTCGGTCCC 
GACGATCAAT TGGGGTCCCT GAACTACATC ACACCCGACG TGGTGCGCAG GGCGGTGCGG
GAAGTCCGCA CCGGGCGCAG CCTTTGTCTG AGCCTGCCGC TCGACTATCC GGGTGGCAAT
GTGCTCAACC CGCGCCGGCA TCCGCCACGG CTGCGGCCGA CCGAGCGCGA TGGCCGGCTC
GTTTACAACC TTCCGCTATC GGCATCGGCG CACGAACACA CCGATGTGCT GTGCGACGAC
TCGGTGCTGC TGCACACGCA GTACTCGACG CAATGGGACA GCTTTGCCCA CGTCGGCCAT
CGCTTCGACG TACAGGGCGA CGGCAATCCG GTGGCGGTCT ACTACAACGG TTTTCGCGCC
GGCGTGGACG TGGTGGGGCC GGGCGATCCC GACGGCCGGC CGATGGGCGC CCATCGGCTC
GGTATCGAGA CCTTCGCGGT CAAGGCGATC CAGTCGCGCG GCGTGCTGGT GGACCTGCTC
GCATCGTGTG GCCGCGAGCG TGTGTACGTC GGCTATGACC ATTTGATGCG CGCGCTGGAC
GTGGCGCGCG TCGAAGTCGA GCCCGGCGAC ATCCTGTGCC TCTACACCGG CTTTGCCGAC
ATGCTGCTGG AAATGGAGCG TCAACCCGAT CCCCATTTGC TCGAACGAAG CTGCGCGGTG
CTCGACGGCC GCGATGCCAG GCTGCAGCAA TGGATCGTCG ACCAGCGCAT CGCTGCGCTG
TGCGCGGACA ACTACGCGGT TGAGGGCATT CCCGCCACGG CGGCATCCAT GCCCTGCGCG
CGCTTGCCGC TGCACGAGCT GTGTCTGTTC CGCTATGGCA TTCCGCTCGG TGAACTCTGG
TATCTCGCGG AGCTGGCCGC TGCGCTGAAG GCCGAGGGTC GCACGCGTTT CCTGCTGACC
GCGCCGCCGT TGCGCCTGCC GGGTGCGGTG GGTTCGCCAG TGACGCCCGT GGCAACGATC
TGA
 
Protein sequence
MTISRWKQRP AASNWGDFGP DDQLGSLNYI TPDVVRRAVR EVRTGRSLCL SLPLDYPGGN 
VLNPRRHPPR LRPTERDGRL VYNLPLSASA HEHTDVLCDD SVLLHTQYST QWDSFAHVGH
RFDVQGDGNP VAVYYNGFRA GVDVVGPGDP DGRPMGAHRL GIETFAVKAI QSRGVLVDLL
ASCGRERVYV GYDHLMRALD VARVEVEPGD ILCLYTGFAD MLLEMERQPD PHLLERSCAV
LDGRDARLQQ WIVDQRIAAL CADNYAVEGI PATAASMPCA RLPLHELCLF RYGIPLGELW
YLAELAAALK AEGRTRFLLT APPLRLPGAV GSPVTPVATI