| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4901 |
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| Symbol | |
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| ID | 4041763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1564010 |
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| End bp | 1565311 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637980322 |
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| Product | putative regulator containing a HipA-like domain |
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| Protein accession | YP_587032 |
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| Protein GI | 94313823 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.460954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.048459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGT CGATCCGCTA CCTGCGCCTG TTTCTCTATA CGGCTACCGG GCGCCGTGGC
ATCGGCTACC TGTCCCAGTA TGGCGACATC CTCCGGATCT CTTTCGACCG TGATTACATC
GAGGACGAGA ATCGCCCCAC GTTGTCGCTC GGATACGTCG GCGAGACAGA GGCGGCTACG
CGGGCGATCC TCACGGCGCT ACGGGACGTA CGAGTGGTCC GCACGGACGG TCACTGGCCG
GTGTTCTTCC AGAACCTCCT GCCGGAGGGC CACAATCGCG AGCGCCTGGC CAGCGAGCGC
GGCTGCAGCA CGGAAGACGA GTTCGAACTG CTGGCGGCGG CCGGTCACGA CTTGCCGGGC
GCGGTGGAAG TCGAACCCGT TCCGCCCGCC GAAGGCGTGC CCCAGATCGT GCGCAATTGG
CACACCGCGC TAGGGCTCGA TGTGCTGGAG CCCGGCTTCG TCGAAGACCC GGTGGAAGAC
GCCGCGGCCA TCCCCGGCGT GGTCACGAAA TTCTCGGCCA TCCAGCAGGG ACGGCGTTAC
GTGGTCAAGC GCCACGGCGA GGCTGGCGAC TTCATCCTCA AACTGCCATC GACGCGCCAT
CCCGATCTGG TCGAGAACGA ATTCACGGGT TACCAGCTAT GCAGGGCCCT AGGGCTCGAT
TGCGCAGAGG CAACAGTCAT CTCGCGCGAG GAAGCCGAGC TACCCGAGCA GGTGCCCTTC
CAGCGCATTC TGGCCGTCAA ACGCTTCGAT CGCGCCCCTG GCGGGCATCG CGTGCACATG
GAGGAGTTCG CGCAGATACT CGGGTACGCA CCGCGAAACA AGTACGGTCG CGCGCTCGCG
CTCGACTACG GCAATATGCT TCGCGTACTC GATCGACTTT CGGCGCGCCC CGCGCCCGAC
GTCCAGGAGT TCATCAAGCG TTTCGTTGCA TTCCTGCTGA TGGGCAACAC CGATGCCCAT
TTGAAAAATT GGGCAGTTCG CTATCCGGAT GGCCGGGCGC CTGTCCTCTC GCCGCTCTAC
GACCCCGTAT GCGTGACGGC GTTTTTCGAC GACGTTCCCG TGACGGACTA CGGCATCAAT
CGCGCGATCG ACAAGACCTT GCGCGCCTAT ACGTTCGACG ACCTCGACGC CATGGTGCGC
TCCGCCGGCC TGCTCAGGCG CGCGCGTTTG CTGTCGATCG CGAGGGAGAC GGTGCGTCAG
GCTCAAGCCG ATTGGCCACG CATTCTGGAG GATGCGCCCG AAGGTGTCCG CCGAGCCGTG
TCGGAGCGTC TCGCCGGTGG TGTGGCACTG ACCCGAACCT GA
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| Protein sequence | MTTSIRYLRL FLYTATGRRG IGYLSQYGDI LRISFDRDYI EDENRPTLSL GYVGETEAAT
RAILTALRDV RVVRTDGHWP VFFQNLLPEG HNRERLASER GCSTEDEFEL LAAAGHDLPG
AVEVEPVPPA EGVPQIVRNW HTALGLDVLE PGFVEDPVED AAAIPGVVTK FSAIQQGRRY
VVKRHGEAGD FILKLPSTRH PDLVENEFTG YQLCRALGLD CAEATVISRE EAELPEQVPF
QRILAVKRFD RAPGGHRVHM EEFAQILGYA PRNKYGRALA LDYGNMLRVL DRLSARPAPD
VQEFIKRFVA FLLMGNTDAH LKNWAVRYPD GRAPVLSPLY DPVCVTAFFD DVPVTDYGIN
RAIDKTLRAY TFDDLDAMVR SAGLLRRARL LSIARETVRQ AQADWPRILE DAPEGVRRAV
SERLAGGVAL TRT
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