| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4890 |
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| Symbol | |
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| ID | 4041752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1552500 |
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| End bp | 1554239 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637980311 |
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| Product | hypothetical protein |
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| Protein accession | YP_587021 |
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| Protein GI | 94313812 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01887] dipeptidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00623806 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.187016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGTC TGACTGCACG ACTGCCAGCA GCAACCCTGC TGGCCGCCGC CCTGCTCGCC
TGCCCGCTGA CACCCATGGC GAACGCGGCG ACCATCGCCA AGCCGGAGCT CGACCAACTC
GTGGCCGGTG CTACGACAAC GCCACCAGCC AGTTTCAATG CCTTCCTCGA CGCCGCGGTC
AAGGCCGACC CGAAACTTGC GCCTTCGGTG CGAGCCTATC GGGCAAAGCG CCCGCTCACG
GGCGACGACC TCGTCAACAT CGGACGCCTG CTCGGTGTCT ACAACCGCGT GCATAACGGG
CATGCCGTGC TCGACAGCAT CAGCGAGATG GTGGCGCTGC GCACGGTGCG CGACGACAAG
GTGCCGCAGC ACGAGAACCC CGCAATCATC GAGTTCGGCA AGCTCGTGGA GCGGATGGCC
AAGGACTTCG GCCTGCACTA TCGCAACATC GACAACCGCG TGTTCGAAGT CACGCTGCCT
GGCACCGGCA AGGACACCTT CGGCATCCTT ACCCATGCCG ACGTGGTGCC CGTGGTGGCC
GACGAATGGG TACTCGACGA TGGCACGAAG CTCGACCCGT TCAAGGTCAC GCGCGTAGGC
GACTACCTCT ATGGACGTGG CACGATCGAC GACAAGGGCT CGATTGCCGC CGCCCTCTAC
GCGATGAAAA CCGTGCGCGA AAGCGGCGTG CCGCTGGCGC GTTCGATCCG GCTGATGATC
GAGACCACCG AGGAAACCGG TGGCGACGGC ATGAAGTACT ACCGCGAGAA AACCGCCCTG
CCCGAGTACA ACATCGTGCT CGACAGCAAG TACCCCGCCG TGGTCGCCGA GAAAGGCTCG
GGCGCGCTGA CCGCGCGCTT CGCGGATCAG GCGGTGGACG GCAAGCAGCC GGCCATCGTG
GCCATGAGCG GCGCCGCCTC GGCCAACGCG ATTCCTCAGA CGGCGACGGC ACGCATCAGC
GGCGGTGACC TGGCAGCCGT GGCCGCCGGC CTGGAAAAGG CGCGCGCCGG TTTCATCGCC
CAGCATGAGG CCCAGGGCAA GTTCTCGATC GACATCGCGC GTGACGGCGA CGTCATCGTC
GTGAAGGTGA CTGGCACGTC CGCCCATGGC TCCCGCCCCG AGGAAGGCGT GAACCCCGTG
CCGCGTCTCG CGATGTTCCT GCAGTCGTCG GGCGTCGCCT TTGCAGACAA CCAGTACGCC
CATGCGATCC GCTACCTGAC CGACCTCTAT GGCACCGACT ATCTCGGGGA AAAGCTCGGC
GTGGCCTATC GCGATGACTT CATGGGTCCG TTGACGATCT CGCCGACGCT GATCCGCGAG
CGCGGCGGCA AGCTCGAAGT CACCGCCAAC GTGCGGATGC CGCGCGGTGC AACGCCCGAT
GCCTTGCGCG CGAAGATCGC CGAGCGCATC CAGGGCTGGG CAGCAACCAC GCACACCGCG
CTGGAAATCC AGCACGAACA GGGCGACTGG ATGGCCCGGG ACCCCAAGGG CGCCTGGCTA
ACCACATTGC TGAACATCTA CGGTGATACC ACCGGGCTCG AAGCCAAGCC CGTGCCGACC
GCCGGCAGCA CCACGGCCAA GCTGATGCCG AACGCGATCA ACTTCGGGCC AGCGATGCCG
GGCAAGAAGT ACACCGCGCA CAACGCGAAG GAGTACAAGG AAGTGCCGGA CCTGAACCTG
GACATGCAGA TGTTCACGGA GATGCTCGTG CGCGTTGGCA ATCTGAAATC GATGCAGTAA
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| Protein sequence | MNRLTARLPA ATLLAAALLA CPLTPMANAA TIAKPELDQL VAGATTTPPA SFNAFLDAAV
KADPKLAPSV RAYRAKRPLT GDDLVNIGRL LGVYNRVHNG HAVLDSISEM VALRTVRDDK
VPQHENPAII EFGKLVERMA KDFGLHYRNI DNRVFEVTLP GTGKDTFGIL THADVVPVVA
DEWVLDDGTK LDPFKVTRVG DYLYGRGTID DKGSIAAALY AMKTVRESGV PLARSIRLMI
ETTEETGGDG MKYYREKTAL PEYNIVLDSK YPAVVAEKGS GALTARFADQ AVDGKQPAIV
AMSGAASANA IPQTATARIS GGDLAAVAAG LEKARAGFIA QHEAQGKFSI DIARDGDVIV
VKVTGTSAHG SRPEEGVNPV PRLAMFLQSS GVAFADNQYA HAIRYLTDLY GTDYLGEKLG
VAYRDDFMGP LTISPTLIRE RGGKLEVTAN VRMPRGATPD ALRAKIAERI QGWAATTHTA
LEIQHEQGDW MARDPKGAWL TTLLNIYGDT TGLEAKPVPT AGSTTAKLMP NAINFGPAMP
GKKYTAHNAK EYKEVPDLNL DMQMFTEMLV RVGNLKSMQ
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