| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4888 |
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| Symbol | lpdA |
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| ID | 4041750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1549938 |
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| End bp | 1551380 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637980309 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_587019 |
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| Protein GI | 94313810 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.226887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0615049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGA ACCAGAATGC CCAGACCGCT CAAACTGTCC AGACCGTCCA GACTGATGTG
GCCATCATCG GCGCGGGCAC TGCCGGCCTG GCCGCCTACC GCGCGGCCAT TGCCGCCGGC
AAGCGCGCCG TGATCATCGA GGGCGGGGCG TATGGCACGA CCTGCGCCCG CGTGGGCTGC
ATGCCGTCGA AGCTGCTGAT TGCCGCGGCG GAAGCCGCGC ACGAAGCGCG TCACACTGCT
GCATTTGGCG TGCACGTGGA TGGCCCGGTC CGTATCGACG GCAGGGAAGT CATGCAGCGC
GTGCGGAGCG AACGCGACCG CTTTGTCGGC TTCGTGGTGC GCGGCGTGGA GAGCATTCCC
CAGGACGACC GCCTGATCGG CCGGGCGCGG TTCATCGACA ACACGATCCT CCAGGTTGAC
GACCACACCG TCGTGCGCGC AAGCCGCGTG GTAATCGCCA CGGGCTCGCG CCCCGCCGTA
CCGCCGTCCT TTGGCGTGTT CGGCGATCGC CTGATCGTCA ATGACGATGT GTTCTCGTGG
GAAGACCTGC CCCAAAGCGT GGCCGTGTTC GGCCCGGGCG TGATTGGTTT GGAACTGGGG
CAAGCACTGT CGCGGCTTGG CGTGCGGGTG CGCGTGTTTG GTGTCGGTGG CGGCGTCGGT
CCGTTGTCGG ACCCCGAGAT TCGTGCTTAC GCTGCCAAGT CCTTCAACCA GGAATTCTCG
CTGTTGGCGG ATGCGCGCGT GCTTGAGATG CGCCGCGAGG GCGACGACGC CGTTATCACG
TTCGAAGACG CCGACGGCCA GACCGTGACG GAGCGCTTTG CCTACGTGCT GGCCGCCACG
GGTCGCCGGC CCAATGTCGA TACGCTTGCG CTGGGCAACA CCGCGCTGGA ACTCGATGGG
CGGGGCGTAC CGACGTTCGA CCCGGTGACG CTCCAGTGCG GTGAATCGCC GATCTTCATC
GCTGGCGATG CCAATAACGT CCTGCCGCTG CTGCATGAGG CGGCCGACGA AGGCAAGATT
GCTGGCGAAA ACGCTGCGCT CTGGCCGAAG GTCGGGCCGC TGACGCGGCG CGCGCCGATC
GCGGTGGTGT TCTCCGATCC GCAGATCGCG ATGGTCGGCA AGCGTTTTGC CGAACTGACA
CCGGGCAGCT TCGTGACTGG CGAGGTCAGC TTCGAGGATC AGGGCCGCAG CCGTGTGATG
CTCAAGAACC GTGGGCTGAT GCACGTCTAC GCGGATCGCG CCACAGGCCG CTTTATTGGC
GCTGAGTGGA TTGGCCCGCG CGCCGAGAAT ATCGCGCATC TGCTGGCGTG GTCGTACCAA
CAGGGGCTGA CGATCGCCGC GATGCTGGCC ATGCCTTTCT ACCATCCCGT TGTGGAAGAG
GGCTTGCGCA CGGCGCTGCG TGATGCGCAA GCCAAGCTGG CGCAATTGCA GGAAGCCGCC
TGA
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| Protein sequence | MNTNQNAQTA QTVQTVQTDV AIIGAGTAGL AAYRAAIAAG KRAVIIEGGA YGTTCARVGC
MPSKLLIAAA EAAHEARHTA AFGVHVDGPV RIDGREVMQR VRSERDRFVG FVVRGVESIP
QDDRLIGRAR FIDNTILQVD DHTVVRASRV VIATGSRPAV PPSFGVFGDR LIVNDDVFSW
EDLPQSVAVF GPGVIGLELG QALSRLGVRV RVFGVGGGVG PLSDPEIRAY AAKSFNQEFS
LLADARVLEM RREGDDAVIT FEDADGQTVT ERFAYVLAAT GRRPNVDTLA LGNTALELDG
RGVPTFDPVT LQCGESPIFI AGDANNVLPL LHEAADEGKI AGENAALWPK VGPLTRRAPI
AVVFSDPQIA MVGKRFAELT PGSFVTGEVS FEDQGRSRVM LKNRGLMHVY ADRATGRFIG
AEWIGPRAEN IAHLLAWSYQ QGLTIAAMLA MPFYHPVVEE GLRTALRDAQ AKLAQLQEAA
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