| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4881 |
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| Symbol | catA |
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| ID | 4041743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1543053 |
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| End bp | 1543976 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637980302 |
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| Product | Catechol 1,2-dioxygenase |
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| Protein accession | YP_587012 |
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| Protein GI | 94313803 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.405251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.494696 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCACG CTGACATCGA AGCGCTGGTA AAGCAGTTCC TCGTACACAC CGCCACGCAA
GGCACCCCGG ACGCACGCGC GCAACAGGTC GTGGTACGGC TGACGACCGA TCTGTTCAAG
GCAATCGAGG ATCTGGATTT GAGCGCCACC GAAGTCTGGA AGGGCATCGA GTATTTCGCC
GAGGCAGGCG CCACCCACGA GCTGGGCCTG CTGGCCGCCG GCCTGGGTCT GGAACGATTC
CTGGACATCC GCGCCGACGA GGCAGAAGCC CGCGCCGGCC TGACCGGCGG CACGCCGCGC
ACGATCGAAG GCCCGCTGTA TGTGGCCGGC GCGCCCGAAT CCACCGGCTT CGCACGACTC
GACGACGGCA CGGAGGACGA CAAGGGCGAG GTGCTGTTCA TGCAGGGCAC GGTCTACGAC
ACCGACGGCA AGCCGCTGGC CGGCGCGAAG GTCGAGGTAT GGCACGCCAA CCTGCTTGGC
AACTACTCGT TCTTCGACAA GAGCCAGTCC CACTTCAACC TGCGCCGCAC GATCGTCACC
GATGCCAACG GCCGCTACCA GTTCCGCAGC ATCGTGCCGA TGGGCTATGG CTGCCCGCCC
GAGGGCACGA CGCAGCGCCT GCTGAACCTG CTGGCCCGTC ACGGCCGCCG CCCCGCACAT
ATTCACTTCT TCGTATCCGC CGCCGGCCAT CGCAAGCTGA CCACGCAGAT CAACATCGAC
GGCGACGAGT ACCTGTGGGA TGACTTCGCG TTTGCCAGCC GCGATGGACT CGTGCCGGCG
GTCGAGCGCG TCGGGGACGC CGCGCAGCTC GACAAGCACG GCGTGAGCAA GCCGTTCGCC
TCGATCGACT TCGACTTCCG CCTGCTGCGC GAGGCCACCG ACGCCCCGGC GGCCGAAGTG
GACCGCCTGC GCGCTGCCGC CTGA
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| Protein sequence | MTHADIEALV KQFLVHTATQ GTPDARAQQV VVRLTTDLFK AIEDLDLSAT EVWKGIEYFA
EAGATHELGL LAAGLGLERF LDIRADEAEA RAGLTGGTPR TIEGPLYVAG APESTGFARL
DDGTEDDKGE VLFMQGTVYD TDGKPLAGAK VEVWHANLLG NYSFFDKSQS HFNLRRTIVT
DANGRYQFRS IVPMGYGCPP EGTTQRLLNL LARHGRRPAH IHFFVSAAGH RKLTTQINID
GDEYLWDDFA FASRDGLVPA VERVGDAAQL DKHGVSKPFA SIDFDFRLLR EATDAPAAEV
DRLRAAA
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