| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4878 |
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| Symbol | catB |
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| ID | 4041740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1539789 |
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| End bp | 1540913 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637980299 |
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| Product | muconate cycloisomerase |
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| Protein accession | YP_587009 |
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| Protein GI | 94313800 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR02534] muconate and chloromuconate cycloisomerases |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.752698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCGA CGATTTCTTC CATCGAGGCC ATTCTGGTCG ACCTGCCCAC GATCCGGGCG
CATCAGTTGG CCATGGCCAC GATGCAGCAG CAGACGCTGG TGATCGTGCG GCTGCGCTGC
AGCGACGGGA TCGAGGGCAT CGGTGAGGCC ACTACAATTG GCGGCCTGTC GTACGGCGAC
GAAAGTCCCG AGGGCATCAA GCTGACGATC GATACCTACC TGGCGCCGGC ACTGGTCGGC
CAGGACGCCA CCAATGTCCA CGCCGCGATG GCGCGCCTGA ACAAGGTCGC GCGCGGTAAC
CGGTTCGCCA AGTCGGCGCT GGAATCGGCC ATGCTCGACG CGCAGGGCAA GCGTCTGGAC
GTGCCGCTGG CCACGCTGCT GGGTGGCGCG GTGCGCGACA CGCTGCCGGT GCTCTGGACA
CTGGCCAGCG GTGATACCGC ACGCGATATC GAGGAAGCCG AGCGCTTTCT GGAGGAACGC
CGCCACAACA CGTTCAAGCT CAAGATCGGT CGCCGCAGCG TGCGTGAAGA TGTGGCGCAT
GTCTCGGCGA TCAAGCGCGC CCTGGGCGAT CGCGCCCGCG TGACGGTAGA CGTGAACCAG
GCCTGGAACG AAGCCGATGC CGCCACCGGC ATCGCCATGC TCGAAGCGGC CGGCATCGAC
CTGATCGAAC AACCGACGCC GCGCGAGCAA CGCACGGCGC TGGCGCGTCT GGCCGCCCGT
TTCGTGGTGC CGATCATGGC CGATGAAGCC GTGACGGGCC CCGAGGATGC AATGGAACTG
GCACGCCTGG GCGCCGCCGA TGTGTTCGCG CTGAAGATCG CCAAATCCGG TGGCATCTTC
GGCATGTTGC GGACTGCGGC CGTGGGCGAT GCAGCAGGTA TCGCGCTCTA CGGTGGCACG
ATGCTCGAAG GCAGCGTCGG CACGATCGCC GCGGCGCATG GCTTCTGCAC GCTGCCGCAA
CTGGCGTGGG GCACGGAATT GTTTGGCCCG CTGCTGGTGA AGGACGATAT CGTTGTCGAG
CGCCCCGTAT TCAAGGACTT CTCGCTGCAT CTGCCGCAGG GTCCGGGGCT GGGTCTGGCA
ATCGACGAAG ACAAGCTTGC GCACTATCGT CGCAAGTCCG CTTGA
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| Protein sequence | MTATISSIEA ILVDLPTIRA HQLAMATMQQ QTLVIVRLRC SDGIEGIGEA TTIGGLSYGD
ESPEGIKLTI DTYLAPALVG QDATNVHAAM ARLNKVARGN RFAKSALESA MLDAQGKRLD
VPLATLLGGA VRDTLPVLWT LASGDTARDI EEAERFLEER RHNTFKLKIG RRSVREDVAH
VSAIKRALGD RARVTVDVNQ AWNEADAATG IAMLEAAGID LIEQPTPREQ RTALARLAAR
FVVPIMADEA VTGPEDAMEL ARLGAADVFA LKIAKSGGIF GMLRTAAVGD AAGIALYGGT
MLEGSVGTIA AAHGFCTLPQ LAWGTELFGP LLVKDDIVVE RPVFKDFSLH LPQGPGLGLA
IDEDKLAHYR RKSA
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