| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4829 |
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| Symbol | qseB |
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| ID | 4041691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1483082 |
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| End bp | 1483789 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637980250 |
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| Product | DNA-binding response regulator |
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| Protein accession | YP_586960 |
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| Protein GI | 94313751 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00101292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0130353 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGAATCC TGATTGTTGA AGACGACCCG ATGCTCGGCG ACGGGCTCCA GCGCGGCCTG
AAACTGATAG GTCATGCCGT GGACTGGTTT GGCACCGCCG CCGAAGCCGA CCGTGCCATT
GGCATGATGC ACTACGACGC CGTAGTGCTG GACCTTGGTC TGCCAGACGA CGATGGCGTG
GCGTTGCTTG GCCGTTGGCG CCAGCAGGGC CGGCAGATGC CAGTCGTGGT GCTGACCGCG
CGCGATGCCG TGGCCAGCCG GATCTCCGGG CTAGACGCCG GCGCCGATGA CTACCTGGTC
AAGCCAGTGG AACTGGACGA GCTGGCCGCC CGGCTTCGCG CAGTCACCCG CCGCGCGGCC
GGGATGCCCG AGCCCGTCTG GCGTCATGGC CCACTCGAGT ACCAGCCCGC TGCGCGCCTG
GCGCTCTGGC ACGGCAAGGC CGTGGACCTG ACCAGCCGGG AATCCATGCT GCTGGAACTG
TTGCTGACCT ACCCCAACCG TGTGCTGACG CGCGAATTCC TGCGCGACAA GCTCTATGAC
TGGGACAAAG GCTCCGAAAG CAACACGCTG GAAGTCCACA TCCATCACCT GCGCAAGAAG
CTCCATCCCG GCATCGTGCG CACGCTGCGC GGCGCCGGCT ACACCCTGGG CACGCTCGAG
GCGATCGAGA TCGGCACCTC GGAACCCGAG GGCGGGGATC GCGCATGA
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| Protein sequence | MRILIVEDDP MLGDGLQRGL KLIGHAVDWF GTAAEADRAI GMMHYDAVVL DLGLPDDDGV
ALLGRWRQQG RQMPVVVLTA RDAVASRISG LDAGADDYLV KPVELDELAA RLRAVTRRAA
GMPEPVWRHG PLEYQPAARL ALWHGKAVDL TSRESMLLEL LLTYPNRVLT REFLRDKLYD
WDKGSESNTL EVHIHHLRKK LHPGIVRTLR GAGYTLGTLE AIEIGTSEPE GGDRA
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