| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4796 |
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| Symbol | |
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| ID | 4041658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1440417 |
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| End bp | 1443152 |
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| Gene Length | 2736 bp |
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| Protein Length | 911 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637980217 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_586927 |
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| Protein GI | 94313718 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGAAG GTTGGAATGA CACTGCGAAG CTGGTAGCAG GCAGGCAAGT CTATTTTCTG
GAGGTCCCTG GCGCATCGAG CGCGGCAGAG CTTTCAGTCG TGTCGTTCGA AGCCGTCGAA
CGGCTGGGAG ATCCCTACAG GGTCACCGTC CAACTGACGC ACCCGGTGGA TCTGGATCGG
GCTGAGTACC TGAACCGGAA CGCCACCTTC GTCATCCATG CGGGCGATGA CAGCGAACCC
CGTAAGTTCG CGGGATGGAT CTCCGAGTTC TCGAAGACCC GCCAAACTCG CGACTTCTGT
GGCTACGAGA TCGTGGTCGA GCCGCTAGTG TCGCGCCTGA GGCTCACGCA GGCCAGCCGC
ATCTACCAGC AGAAGACCGC CCCGCAGATT ATTGAGGCCG TCCTGCGCCG CCACGACCTC
AAGGGCCATC AGTTCGCATT CAATCTGCGG CGCAAATATC CGCAGCTTGG TTTCCGAATG
CAACACCAGC TTTCGGACTG GGACTATATC CGGCTGCTGA TGGAGCAAAA CGGGATCTAT
TGCTATTTCG CGCCGGGCAA GTTCGGGGAG CAGATCGTCT TCGGCGACGA CATCGACCAC
TACATCTACC TGCCGCAACG GATCGTGCCG TACCGCGAGA CGGCCGGACT CGAATCAGGG
CAGGAGACAG TCTTCTCGCT CAAGACCCAT GCGAAGACCA TCCCCGAATC GTTCCGGGTG
GCGGACTACA ACCAGAACAA GGCGTGGGAG CGGCTCACCG GCGACGCCAA CGTCGCACGC
AAGGAGAATA CCTACGGCCA GTCCTATGTC TTCGGCACGA ACCATCTGGA CTTTGATGAG
GCCAAGTGGG AAGCGCTGCT GCGGCATGAG GCGAAGTACG CCGAACAACT GGTCTACGCG
GGCGAAAGCA ATGTACTCGC GCTGTGCCCG GCGCGCATCC TGCGCCTCGA CCTGGCGTTG
CCCGATGCGC CCAACGGGCA GGTCATCACG GAAGTCGTTC ACACCGGTGC CCGCGACGCC
GCGTATCGCA ACACCTACAA GGCCATTCCC TCGGACCGGC GCTTCCGCCT GCCGCTGGAC
GAGGCCAATT GGCCGCGCAT TTCCGGCACG CTAAGTGCAA GAATTACCTC CCCCGGCGAC
TACAAATACG CCTACCTGAC GCAGCAGGGT CAGTACATCG TCCGCTTCGA TTTCGATTTC
GACACCTGGC CCAACGGCGG CGAAAGCGTG CCGCTGTGGT TCGCCAAGCC GTTCGCTGGC
GCGAACCAAA CGGGCTTCCA CTTCCCGCTC ATCGACGGCA CGTACGTAGA CGTGGCCTTC
CGTGACGGCA ACCCCGACAA GCCATACATT CTAAGCGCGC AACACACCAG CCAGCACCCC
GAACTGATCA CCAATCAGGA CCGGTGGATG TCGCGCAACG TCCTCCGCAC GCAGAGCGAC
AACGAGTTCG AAGCAGAAGA TTGGGAAGGT CAGGAGCACG TCAAGGTCTC CACCGAGCAT
TCGGGCAAGA GCCAACTCAC ACTCGGCCAC ATCGTCAACG GCAAGCGCGA GAAGCGCGGC
GAAGGATTCG AACTGCGCAC CGACGCCTGG GGGGCCGTGC GCAGCGGCAA GGGACTGTTC
CTGAGCGCCG ACAAACAGGC TAGCGCGGGC GGACAGGTCC TTGACATGAG CGCCGCGCTA
GAGCAATTGC ACGCCGCTCA ATCGCGCATG CAAAGTCTGT CCGACGCGGT ACGCGAGGCG
AAAGCGGTCG TCGCCGACTG CGAGGCGCAG AAGACGATGC TGGAGACCCA GCTCAAGGAC
TTGCAGCAGG CGGTGCTACT CGGCAGTGCC CCGCAAGGGC TTGCGCTGAC CAGCGGCGGG
CACATGCAGT TCTCGTCGGC AGGCCACCTT TTCACGACGG CCGGGGGCAA TGCCGACGCG
GCTGTTGGTG GCAACTACAC CGTGGCCGCC AGCGATGCCG TTTCGCTCTT TGCCTGCGCC
AAGGGCATGA AATTCTATGC CGGGGCAGGA CCCGTCGATG TACAGGCCCA GGGCGATGCG
ATGAGCCTTA CCGCGCTCAA GGGCGTCACG ATTGCCAGCA CCAGCGACTC TGTCACGCTC
GTTGCCGACA AAGCGCTCAC GCTGATGTGC GGCGGTGCCT ACATCAAGCT GGCACAGGGC
CTGGTCACCA TCGGCAGCAC CAGTGACATC CAGTGCCATG GCCCGCTGCG CATCGGGCCA
TCGGCCGGAC GGCATCAGGC GCTGCCGCAG TTGCCGACGC AGAAACAAAC CGGGCTGCAA
CTCTGGCATG CCTACCCGAA CGGTGAGCCA GTCAAGAACG CCAGCTATGT GGTGCAGTTT
CCTGACGGCA CCACGCGCTA CGGCACCCTG GATGCCAATG GACGCGGCAC CCTGGCTAAC
GTGCCGCGTG GCGGCGGCAC AGTCCACTAT TTCGAAGAAC CCGGCGACCT GGAGAGCCGG
GCCAGGAAAT GGCGGGAGCC TCAGTTCAAC GCCAACGCGC TGCCAATGCC TGCAGGCGCT
AACAACGGTT TGCCAAGCCT CACCGGGCCA ATCATGGCGA CCGCCGCCAG TCAGGCGCAA
TCGGTTGCCG GCCCAGCGCT GACCAAGTCC GCGCTTGGCG CCGCAACCGG CAAGGCTGCG
AAGGTCGTTG CCACGCTCGA CAAGGCTGTA GCAGACGCCA GCACTGGCAC GGCAACGACC
GCAGGCCGGC CTGCTCAGGC AAAGAGACTG ACGTAA
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| Protein sequence | MVEGWNDTAK LVAGRQVYFL EVPGASSAAE LSVVSFEAVE RLGDPYRVTV QLTHPVDLDR
AEYLNRNATF VIHAGDDSEP RKFAGWISEF SKTRQTRDFC GYEIVVEPLV SRLRLTQASR
IYQQKTAPQI IEAVLRRHDL KGHQFAFNLR RKYPQLGFRM QHQLSDWDYI RLLMEQNGIY
CYFAPGKFGE QIVFGDDIDH YIYLPQRIVP YRETAGLESG QETVFSLKTH AKTIPESFRV
ADYNQNKAWE RLTGDANVAR KENTYGQSYV FGTNHLDFDE AKWEALLRHE AKYAEQLVYA
GESNVLALCP ARILRLDLAL PDAPNGQVIT EVVHTGARDA AYRNTYKAIP SDRRFRLPLD
EANWPRISGT LSARITSPGD YKYAYLTQQG QYIVRFDFDF DTWPNGGESV PLWFAKPFAG
ANQTGFHFPL IDGTYVDVAF RDGNPDKPYI LSAQHTSQHP ELITNQDRWM SRNVLRTQSD
NEFEAEDWEG QEHVKVSTEH SGKSQLTLGH IVNGKREKRG EGFELRTDAW GAVRSGKGLF
LSADKQASAG GQVLDMSAAL EQLHAAQSRM QSLSDAVREA KAVVADCEAQ KTMLETQLKD
LQQAVLLGSA PQGLALTSGG HMQFSSAGHL FTTAGGNADA AVGGNYTVAA SDAVSLFACA
KGMKFYAGAG PVDVQAQGDA MSLTALKGVT IASTSDSVTL VADKALTLMC GGAYIKLAQG
LVTIGSTSDI QCHGPLRIGP SAGRHQALPQ LPTQKQTGLQ LWHAYPNGEP VKNASYVVQF
PDGTTRYGTL DANGRGTLAN VPRGGGTVHY FEEPGDLESR ARKWREPQFN ANALPMPAGA
NNGLPSLTGP IMATAASQAQ SVAGPALTKS ALGAATGKAA KVVATLDKAV ADASTGTATT
AGRPAQAKRL T
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