| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4780 |
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| Symbol | |
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| ID | 4041642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1423873 |
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| End bp | 1424868 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637980201 |
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| Product | putative branched-chain amino acid ABC transport system permease |
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| Protein accession | YP_586911 |
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| Protein GI | 94313702 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00234016 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.219755 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCC GTGTGCATCG TCTGCCCGAT GGCCGCTGGC ATCCGGCGGA GATCGTGTTC
TGGCTGGCGC CGGTCGTGGC GTTCTTCTTG CTGCCCGACT ACCTGATCCT CGGCAGCCAG
ATCCTGATCG TTGGACTCTT CGCGCTATCG CTCGATCTGA TTCTGGGTTA TGCGGGCATC
GTGTCGCTGG GCCATGCGGC GTTCTTCGGC CTGGGCGCGT ACATGGCCGG TCTGCTTGGC
GCGCATGGCT GGGGTGAGCC GCTCACGGGC TTGCTAGCCG CAGCTGCGGT GGCGGCGCTG
GCCGGATGGC TGTGCAGCTT CCTCGTGATC CGGGGCGGCG ATCTGACCCG CCTGATGGTG
ACGCTCGGCA TCGGTCTGAT GTTGTTCGAG GCGGCGAACA AGGCGGCATT TCTGACGGGT
GGCGTCGACG GGCTCTCCGG CGTGACGATG AACAAGATCC TTGGCATGTT CGAGTTCGAC
CTGTTCGGCA AGACCGCCTA TGTCTACAGC CTGGTGGTGC TGTTTGTGAT CTTTCTGCTG
GTGCGAAGGC TGGTGGCTTC GCCATTCGGT CTGTCGCTGC GGGGTATTCG CGAGGGTGCG
CGGCGAATGC CAGCGCTTGG GACCGACGTG CCCGCACGAC TTCGGGCGGT CTTCACGGTG
GCAGCGGCGA TTGCCGGCGT GGCGGGCGGC TTGCTGGCCC AGACCACGCA GTTTGTCGGC
ATGGATGTGC TCGGCTTTCC GCGCTCGGCT GAATTGCTGG TGATGCTGGT GCTTGGTGGC
ACTGGGCGGC TTTACGGCGC GTTGGTTGGC GCGGCATTGT TCATGATCGC GCAGGACGTC
CTGGCTGGTA TCAACCCCGT GTACTGGCAA TTCTGGATCG GGTTGCTGCT GGTGGTCATC
GTGTTGTTCG CGAGAGGTGG TGTGATGGGG GCGCTGTCGG CGCTCGGCCG GCGCAGGCAT
CCGTCCGAGC CAGCGCGAAA GGAGGTCGAC GCATGA
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| Protein sequence | MKTRVHRLPD GRWHPAEIVF WLAPVVAFFL LPDYLILGSQ ILIVGLFALS LDLILGYAGI
VSLGHAAFFG LGAYMAGLLG AHGWGEPLTG LLAAAAVAAL AGWLCSFLVI RGGDLTRLMV
TLGIGLMLFE AANKAAFLTG GVDGLSGVTM NKILGMFEFD LFGKTAYVYS LVVLFVIFLL
VRRLVASPFG LSLRGIREGA RRMPALGTDV PARLRAVFTV AAAIAGVAGG LLAQTTQFVG
MDVLGFPRSA ELLVMLVLGG TGRLYGALVG AALFMIAQDV LAGINPVYWQ FWIGLLLVVI
VLFARGGVMG ALSALGRRRH PSEPARKEVD A
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