| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4739 |
|---|
| Symbol | nnrU |
|---|
| ID | 4041600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 1384268 |
|---|
| End bp | 1384960 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637980160 |
|---|
| Product | putative MFS superfamily permease |
|---|
| Protein accession | YP_586870 |
|---|
| Protein GI | 94313661 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4094] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0110398 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.189563 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAGTA TTGGTGCGGT GGTGGTGGCG TCAGTCGCCT TCGTGGGCAG TCATTTCCTG
CTGTCTCATC CGTTGCGGGG AGCGCTGGTT CGCGCGGTCG GCGAAAAGGG GTTTCTCGGC
ATCTATTCGC TGGTCGCCTT CCTGACGCTT GGGTGGATGG TGATGACCTA CAAGCGAGCG
CCGGTTTCGT CACCGCTGTG GGTGCCTGGC GACGGGATCT GGGCGGTGGT GACGGTGGTC
ATGCTGATCG CCTCGATCCT GCTGATGGGA TCCCTGATCC GAAATCCGGC GTTGCCCACG
GTTGGCCGCC CGGGCGCCTT CCCGGAGGCT GCGCGCGGCG TGTTTGCGGT GACGCGTCAT
CCGATGATGT GGGCCTTCGC GCTTTGGGGC GTGTGCCATA TCGCTGTGTA TCCGGTGACG
AGGAACATCG TGGTCGCGCT GGCAATGATC GTGCTCGCCC TTGTAGGCGC CGCATTGCAG
GACCAGAAAA AGGAACGGCT GCTGCCAGAC CGCTGGCCGG ACTGGGAGGC CAAGACGAGC
TACCTTCCAT TTGCGGCGAT CGTCACCGGC CGGGCTCGGC TGGCCGGATT TGGCTCGCAC
GCGCTCCTTG GTGGGCTTAT CGTCTGGCTC GCGGCGACCT GGGCCCACCT GCCGCTCGCC
GCGATTGCGG CGGGCATCTG GCGGTGGTTG TAG
|
|---|
| Protein sequence | MGSIGAVVVA SVAFVGSHFL LSHPLRGALV RAVGEKGFLG IYSLVAFLTL GWMVMTYKRA
PVSSPLWVPG DGIWAVVTVV MLIASILLMG SLIRNPALPT VGRPGAFPEA ARGVFAVTRH
PMMWAFALWG VCHIAVYPVT RNIVVALAMI VLALVGAALQ DQKKERLLPD RWPDWEAKTS
YLPFAAIVTG RARLAGFGSH ALLGGLIVWL AATWAHLPLA AIAAGIWRWL
|
|---|
| |