| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4723 |
|---|
| Symbol | |
|---|
| ID | 4041584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 1365389 |
|---|
| End bp | 1366081 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637980144 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_586854 |
|---|
| Protein GI | 94313645 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.72626 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.852816 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGAA CCGCCGCGCC CACACCGCCC ACACCGCCCA CACCGCCCAC ACCGCCCACA
CCGCCCACAC CGCCCACGCG CACCACTTAT CGCCATGGTG ACCTGCGCCG CGCCCTGCTC
GAAGCAGGCA TCGATCTGGC ACGGCAGGGC GGGCCAGATG CCGTTGTCCT GCGCGAGGCG
ACACGCCGAG CGGGCGTGGT GCCGAATGCG GCATACCGGC ACTTCGCGAA CCGGCAGGAT
CTTTTGCAGG CAGTGCGCGC GCACGCGCTG TCCGGCCTGG CGATGGCGAT GGAAGCGGAG
TTGGCGACGA TTCCTTCTGA TGCCGCGCCT GCCGAGCGCG CGCGGGCGAG CCTGCGGGCG
GTAGGCGCGG GCTACCTGCG CTTTGCCTTG GGTGAGACAG GGCTGTTTCG CACCGCATTC
TCGGTTCCCG ACGATGTGGA GGAAGATTCC GATCCGGCAA AAGCCGGCAA TAGCGGACTG
AACCCGTTCG AACTGCTTGG CGCCGCACTG GATCGCTGGG TAGAGGCAGG CCTGCTGCCA
GTCGAACGAC GTCCGGGTGC GGAGTACCTT GCGTGGTCGG CCGTACATGG CCTGGCGATC
CTGCTCATCG ACGGGCCGCT GCGCGGCCGG GCAAGGGAGC AGGCGGGAGT GCTCGGCCAA
CGACTGCTCG ACCTGGTGGA GAAGGGCCTG TAA
|
|---|
| Protein sequence | MNRTAAPTPP TPPTPPTPPT PPTPPTRTTY RHGDLRRALL EAGIDLARQG GPDAVVLREA
TRRAGVVPNA AYRHFANRQD LLQAVRAHAL SGLAMAMEAE LATIPSDAAP AERARASLRA
VGAGYLRFAL GETGLFRTAF SVPDDVEEDS DPAKAGNSGL NPFELLGAAL DRWVEAGLLP
VERRPGAEYL AWSAVHGLAI LLIDGPLRGR AREQAGVLGQ RLLDLVEKGL
|
|---|
| |