| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4680 |
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| Symbol | atoE |
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| ID | 4041541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1310882 |
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| End bp | 1312219 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637980101 |
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| Product | short chain fatty acid transporter |
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| Protein accession | YP_586811 |
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| Protein GI | 94313602 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2031] Short chain fatty acids transporter |
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| TIGRFAM ID | [TIGR00366] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0556803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.668538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTAAGG TCGCCGGGTT CTTTACTGAA CTGATGCGCC GGTATTTGCC GGACCCCTTT
GTATTCGCCA TCGGCCTGAC GTTGCTGACG ATGGTCATGG CAATGCTGGT AGAAGGACAG
GCCGCCCAGG CGGTCATCAC GAACTGGGGC AAGGGGTTCT GGAACCTGCT CTCGTTCACC
ACCCAGATGG CGGTGATTCT GGCGATGGGC TACGTGCTGG CCACCGCGCC GCTGGTCGAC
CGCTTCCTCA ATGCCATCGT CGCCCGCGTG CAGACGCCGC GCGGCGCCAT CATCGTGGCC
ACACTGGTCG GCGGTATCGG CAGCTACCTG AACTGGGGCT TCGGCCTGGT GATCGGCGGC
ATCATCGCCC GCAAGCTGGC GCTGAAGGTC AAGGGCGTGC ATTACCCCCT GATCATCGCC
TCGGCCTACA GCGGCTTCAC GATGTATGGC CTGGGCCTGT CTGCCAGCAT CCCGGTACTG
ATCTCCACCC CGGGCCACCC GATGGAAAAG CTGATGGGCG TGATCGGTCT CAAGGAGACG
ATCTTCTCCA CACCGATGCT GCTGACGAGC CTTGCCGTCA TCGTCACGCT GCCGCTGCTC
AACGCGATGC TGCACCCGCG TGACGCCAAG GAAGTGGTGG AAATCCGCGA GGAGAACAGC
TCCGAGGACC GCGCCGCCGG GCACGGCCAC AGCATGGGCA TCGAGAACAC GCTTGCCACG
CGCATGAACA ACAGCCGCCT GCTGAGCCTG ATCATCGGCC TGTGCGGGCT GGCCTACGCG
GGTCTGCATT TCTCGCAGGG TGGTTCGCTG GACCTGAACC TGATCAACTT CCTGATCCTG
TTTATCGGCG TGCTGTTGCT GGGCACCCCG GCCAACTACG TGGCCAAGCT GAACGAAGGC
ATCAAGACGA TCTCCGGCAT CATCCTGCAG TATCCGTTCT ACGCAGGCAT CATGGCGGTC
ATGGCCGGCT CCGGGCTGGT GGACAGCATC TCGCGCGTGT TCGTCGATAT CGCCACGCCG
CAGACGCTGC CGTTCTGGGG TCTGGTCAGC TCGTTCGTGA TCAACTTCTT CGCGCCGTCC
GGCGGTGGCC ACTGGGTGAT CCAGGGTCCG TTCATGATCG ACGCGGCCAA GGCCATCAAC
AGCTCGGTGG CGCAGACGTC GATGTCGGTC ATGCTCGGCA ACGCCTGGAA TGACCTGGTG
CAGCCGTTCT GGATTCTGCC GGCGCTGGCG CTGTCGAAGC TGAAGCTCAA GGACGTGATG
GGCTACACCG TGATCATGAT GTTCTGGGTC GGCGCGATCT ATATCGTCGC CATGCTGGCC
TGGGGCGCGC AGATCTGA
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| Protein sequence | MSKVAGFFTE LMRRYLPDPF VFAIGLTLLT MVMAMLVEGQ AAQAVITNWG KGFWNLLSFT
TQMAVILAMG YVLATAPLVD RFLNAIVARV QTPRGAIIVA TLVGGIGSYL NWGFGLVIGG
IIARKLALKV KGVHYPLIIA SAYSGFTMYG LGLSASIPVL ISTPGHPMEK LMGVIGLKET
IFSTPMLLTS LAVIVTLPLL NAMLHPRDAK EVVEIREENS SEDRAAGHGH SMGIENTLAT
RMNNSRLLSL IIGLCGLAYA GLHFSQGGSL DLNLINFLIL FIGVLLLGTP ANYVAKLNEG
IKTISGIILQ YPFYAGIMAV MAGSGLVDSI SRVFVDIATP QTLPFWGLVS SFVINFFAPS
GGGHWVIQGP FMIDAAKAIN SSVAQTSMSV MLGNAWNDLV QPFWILPALA LSKLKLKDVM
GYTVIMMFWV GAIYIVAMLA WGAQI
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