| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4652 |
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| Symbol | |
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| ID | 4041513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1282947 |
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| End bp | 1284473 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637980073 |
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| Product | putative drug resistance transporter |
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| Protein accession | YP_586783 |
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| Protein GI | 94313574 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.357628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCGCCT TTGCCTCGAT GTGCGTGGGC ATGTTTATCG CCCTGCTGGA CATCCAGATC
GTCTCCGCGT CGCTGCGTGA TATTGGCGGT GGGCTGTCCG CTGGCGCGGA CGAGACGGTG
TGGGTCCAGA CCGCCTACCT GATCGCCGAG ATCATCGTCA TCCCCCTATC AGGCTGGCTC
GCGCGCGTCA TGTCCACGCG CTGGCTGTTT GCCGCATCAG CCGCCGGATT CACGGCTACC
AGCCTGCTCT GCGGCATCGC GTGGAATATC CAGAGCATGA TCGCCTTCCG CGCGGCGCAG
GGCTTTCTGG GCGGATCGAT GATCCCGATG GTCTTCACCA CCGTCTTCGC GTTCTTCCAG
GGACGTCAGC GTGTGGCCGC CGCCGCGATC ATCGGTGGTC TGGCGTCGCT GGCCCCCACC
CTTGGCCCAA CCATCGGCGG CTGGATCACC GACAATTTTT CGTGGCACTG GCTGTTTTTC
ATCAACCTGG TGCCGGGGAT CTTCGTGACG ATCGCGGTGC CGGCGCTGGT CAAGATCGAC
GAGCCCGACT GGTCGCTGCT CAAGGGGGCG GACTACCTCG GCATCGTACT GATGGCGCTG
TTTCTTGGCT GTCTCGAGTA CACCCTGGAG GAAGGCCCCC GCTGGGACTG GCTGGGCGAC
CGGACGATCC TGACCACGGC CTGGATCTCC GGGCTGGCCG GCATTGGTTT CCTGTGGCGT
TCGCTCACGT ACAAGAACCC GGTGGTAGAT CTACGCGCGC TGAAGGACAT CAACTTCGCG
CTCGGATGTT TCTTCTCGTT TGTGGTCGGC ATCGGAATTT TCGCGACGAT ATATCTGACG
CCGCTGTTCC TGGGTCAGGT ACGCGGATTC AGCGCCCTGC AGATCGGGCT GGCGATCTTC
TCGACGGGCC TGTTCCAGGT GCTATCGATA CCGTTCTATG CCTACCTGGC GAACCGCGTG
GATCTACGCT GGCTGCTGAT GTTCGGCCTC GCCCTGTTTG CGCTATCGAT GTGGAATTTC
GCGCCAATCA CGCACGACTG GGGCGGCGCG GAACTGCTGT TTCCGCAGGC GTTGCGGGGT
ATGGCGCAGC AGTTCGCCGT GGCGCCCACC GTTACGCTGA CGCTTGGCGG CTTACCGCCG
GCACGGCTCA AGCTGGCATC CGGGCTATTC AACCTGATGC GCAACCTGGG CGGGGCCATC
GGTATTGCCG CCTGCGCGAC GATCCTCAAC GACCGGACCA ACCTGCACTT CCTGCGTCTG
GCGGAACACC TGAACATTCG CAACGAGTCC ATGGCCGCTT TCCTCAACGA GGCAACCACG
CACGCGGTGA CGATGAACAA CGAGATCAGT GATGGCAACG CGGCCGCCCT GAAGCAACTC
TGGGCGCTGA CGATGCGCGA GGCCCACACG CTGACCTACG CCGATGCGTT CCTCGCGATC
TTTGTGTGTT TTGTCATCGC GGTTCCAATG GTCGTGCTAA TGCGAAAGGT TGCGCCCCCG
AGCGCGCCGT CTGCGGATGC CCATTGA
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| Protein sequence | MFAFASMCVG MFIALLDIQI VSASLRDIGG GLSAGADETV WVQTAYLIAE IIVIPLSGWL
ARVMSTRWLF AASAAGFTAT SLLCGIAWNI QSMIAFRAAQ GFLGGSMIPM VFTTVFAFFQ
GRQRVAAAAI IGGLASLAPT LGPTIGGWIT DNFSWHWLFF INLVPGIFVT IAVPALVKID
EPDWSLLKGA DYLGIVLMAL FLGCLEYTLE EGPRWDWLGD RTILTTAWIS GLAGIGFLWR
SLTYKNPVVD LRALKDINFA LGCFFSFVVG IGIFATIYLT PLFLGQVRGF SALQIGLAIF
STGLFQVLSI PFYAYLANRV DLRWLLMFGL ALFALSMWNF APITHDWGGA ELLFPQALRG
MAQQFAVAPT VTLTLGGLPP ARLKLASGLF NLMRNLGGAI GIAACATILN DRTNLHFLRL
AEHLNIRNES MAAFLNEATT HAVTMNNEIS DGNAAALKQL WALTMREAHT LTYADAFLAI
FVCFVIAVPM VVLMRKVAPP SAPSADAH
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