| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4581 |
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| Symbol | |
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| ID | 4041442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1197114 |
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| End bp | 1198475 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637980002 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_586712 |
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| Protein GI | 94313503 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0520678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00576912 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTTCGATA ACCGGAAAGT ATGTGCCGAT CCTCGACCGG CGCGGAACCG CTCTTCGCCC
ACGAGTCACT CACATATAAT CCGCAGCACC CAACCTGCAG GCCCGCGCCC CCTGCGTGCC
CAACCGCTTA TGCTCACGGA CCAATCGGAA GCTCGGCAGA CCCGCCGTTA CGTCGAAAAG
CGCGAAGTCA TTCTCGATAC TGCTGCGGCA CTGTTCAACC GCAAGGGGGT GCGCGGCACG
ACCCTGGCCG ACGTCGGGCA ACAGGTGGGG CTCAGCACCA ACAGCGTCAC GTACTACTAC
CGAAAAAAAG AGGATCTGGT CCTGGCCTGC CTGATGCGCG CCATCGCGGA GACGAGCGGT
CTCGTCGATA GGGCGGCGCA AGCGGATAGC CCCAGCGAAC GCGCCCGGGC CTTCATCACG
CTGTTCGTGG CACGGCTGGC GCGGACCGCA GTGGGCGAGA AGCCCGAACT GATGAGCCTG
CGCGAGATTC GCGCCTTGCC CGAGAGCCAT GTGGAGGTCG CCTTCGCCGC CTTTAACGAC
ATGTTCCGGC GCGTCCGTGG GTTGCTGTGC GACGCCTTGC CCAGTGATCC CACTCAGCGC
AGCGCGCTGG GTGCCCGCGC GCACCTGCTG TGGTCGCTGA CCAGCGGAGC TGCCGGCTGG
ATCGATCGAT ATGAAACCGA TGACTATCCA AAGATCGCGC AAACGCTGGC GGACATCGTC
CTGAATGGCA TCGCGGGGCC AAAGTCGGCG TGGCAGGCGG AGTGCGACGT GACGGCGCTG
CTCCCGGCGC TTGCGCAGCC GGAGACGACG CAGCAGGCCT TCCTGCGAGC CGCCACGGAA
CTGCTGAACG AGCAGGGATA CCGTGGGGCG TCTGCGGACC GGATCTCCGC AAGGCTGAAC
CTGACCAAGG GCGCGTTCTA TCACCATAAC GAGAACAAGG ACGACCTGAT TTCGGCGTGC
TTCGACCGCA TGTCCACGGT GATCCGGAAC ACCCAGACGC TGGTCGACGA CCTGCCCGGC
ACGGGATGGG ACAAGCTCTG CGCGGTATCG CGCGCGCTGG TGCATTACCA GTTCTCCAGC
CAGGGACCTC TGCTGCGGCT GACGATCTAT GGCGCCTTGC CAGAGGAGAT GCGGATCGCG
AAGATGCGTG ACATGGCGCG ACTGTCCACC CGTTTCGTCC GCCTCCTGGT GCAGGGAATG
CAGGACGGCT CGGTGCGCCC ACTGGACCAG GCGATTGCGG CGCTGCAAGT GCATGGCATG
ATCAATGCGG CCGTGGAACT CCGCCGCTGG GTGCGCGATG CCGACGCCGA CAATGCCGCC
GACCTGTTCG TGCGTCCGAT GATGGTGGGG TTGTTGCGTT AA
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| Protein sequence | MFDNRKVCAD PRPARNRSSP TSHSHIIRST QPAGPRPLRA QPLMLTDQSE ARQTRRYVEK
REVILDTAAA LFNRKGVRGT TLADVGQQVG LSTNSVTYYY RKKEDLVLAC LMRAIAETSG
LVDRAAQADS PSERARAFIT LFVARLARTA VGEKPELMSL REIRALPESH VEVAFAAFND
MFRRVRGLLC DALPSDPTQR SALGARAHLL WSLTSGAAGW IDRYETDDYP KIAQTLADIV
LNGIAGPKSA WQAECDVTAL LPALAQPETT QQAFLRAATE LLNEQGYRGA SADRISARLN
LTKGAFYHHN ENKDDLISAC FDRMSTVIRN TQTLVDDLPG TGWDKLCAVS RALVHYQFSS
QGPLLRLTIY GALPEEMRIA KMRDMARLST RFVRLLVQGM QDGSVRPLDQ AIAALQVHGM
INAAVELRRW VRDADADNAA DLFVRPMMVG LLR
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