Gene Rmet_4573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4573 
Symbol 
ID4041434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp1186792 
End bp1187892 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content66% 
IMG OID637979994 
Productacyltransferase 3 
Protein accessionYP_586704 
Protein GI94313495 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0958531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00953157 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCCCC GGCCTTCTCG TTTGGCGTGT GTAGACGCGC TGAAGGCGGT CAGCTCGCAG 
CTGATCGTGT TGCACCATCT GGCCTTCTAT GGGCCGATGT CCGATGCCGC CCAATCTCTG
GCCCCCGGCC TGATCGGCTG GCTGTCTGAC TACGCGCGCA TCGCGGTGCA GGTGTTCCTG
GTCATCAGCG GATTCCTTGC CGCGCGCAGC CTGGCTCCCG CCGGACGCCT GACCGCCCAG
AGCCCGCTTT CCACGGTATG GCGCCGCTAT CAGAAACTGG TCGTGCCCTA CACCGTGGCG
ATGCTCGTCG CGATCATCGG CGCCGCCATC GCGCGGACGT GGATGCATCA CGACTCGATA
CCCGCCGCGC CGCACCTGAC GCAGGTCATC GCGCACATCC TGCTGCTGCA CAACATCCTC
GATGTGGACG CGCTGTCCGC AGGCGTCTGG TATATCGCGA TCGATCTGCA ACTGTTCGCG
CTGCTGGTAT TCGCGCTCTG GCTGGCGCGC GCGGTGTCAC GCGATACGTT GCCGCTGGGC
GTGCCGACGG TGGCCGCGCT AGCGGTGGCC TCGCTGTTCT GGTTCAACCG TGATGCCACC
TGGGATATCT GGGCGATCTA CTTCTTTGGC GCCTACGGCA TGGGCACGCT CGCGTACTGG
GCGTCGAACC CCGATCGTTC TCCGGTGGCC CTGATCGCGC TTGGCGCGGT TGGCGTGGCG
GCCCTGACGA TGGACTTCCG CCTGCGTATC GCCGTCGCGC TGGTCACGGC GCTGGTGCTG
GCCATCTCCC GCCGCGGGGG CTGGCTCGAG CATTGGCCGG GTGGCCGCGT CACCGCATAC
TTCGGCAAGA TCTCGTACTC GGTCTTCCTC GTGCACTTTC CGGTCTGCCT GGTAGTGAAC
GCCTTGGTGT TCCATTTCGC TCCGGGCCAG CCGATGCTCA ACGCTTTGGG GATGTTGCTG
GCGTGGGTCG CCAGCAACGT AGCCGGCGCT GTATTCCATC GCTATGTGGA GGCTGCCAGC
CCGCTGCGCT CGGTGATCGA CTTCGTCAAG GAAGGGATTC ACACCCGCAA GTGGACGCGG
GGCGAAAAGC CCCAGGCCTG A
 
Protein sequence
MSPRPSRLAC VDALKAVSSQ LIVLHHLAFY GPMSDAAQSL APGLIGWLSD YARIAVQVFL 
VISGFLAARS LAPAGRLTAQ SPLSTVWRRY QKLVVPYTVA MLVAIIGAAI ARTWMHHDSI
PAAPHLTQVI AHILLLHNIL DVDALSAGVW YIAIDLQLFA LLVFALWLAR AVSRDTLPLG
VPTVAALAVA SLFWFNRDAT WDIWAIYFFG AYGMGTLAYW ASNPDRSPVA LIALGAVGVA
ALTMDFRLRI AVALVTALVL AISRRGGWLE HWPGGRVTAY FGKISYSVFL VHFPVCLVVN
ALVFHFAPGQ PMLNALGMLL AWVASNVAGA VFHRYVEAAS PLRSVIDFVK EGIHTRKWTR
GEKPQA