Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4573 |
Symbol | |
ID | 4041434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 1186792 |
End bp | 1187892 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637979994 |
Product | acyltransferase 3 |
Protein accession | YP_586704 |
Protein GI | 94313495 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0958531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00953157 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCCCC GGCCTTCTCG TTTGGCGTGT GTAGACGCGC TGAAGGCGGT CAGCTCGCAG CTGATCGTGT TGCACCATCT GGCCTTCTAT GGGCCGATGT CCGATGCCGC CCAATCTCTG GCCCCCGGCC TGATCGGCTG GCTGTCTGAC TACGCGCGCA TCGCGGTGCA GGTGTTCCTG GTCATCAGCG GATTCCTTGC CGCGCGCAGC CTGGCTCCCG CCGGACGCCT GACCGCCCAG AGCCCGCTTT CCACGGTATG GCGCCGCTAT CAGAAACTGG TCGTGCCCTA CACCGTGGCG ATGCTCGTCG CGATCATCGG CGCCGCCATC GCGCGGACGT GGATGCATCA CGACTCGATA CCCGCCGCGC CGCACCTGAC GCAGGTCATC GCGCACATCC TGCTGCTGCA CAACATCCTC GATGTGGACG CGCTGTCCGC AGGCGTCTGG TATATCGCGA TCGATCTGCA ACTGTTCGCG CTGCTGGTAT TCGCGCTCTG GCTGGCGCGC GCGGTGTCAC GCGATACGTT GCCGCTGGGC GTGCCGACGG TGGCCGCGCT AGCGGTGGCC TCGCTGTTCT GGTTCAACCG TGATGCCACC TGGGATATCT GGGCGATCTA CTTCTTTGGC GCCTACGGCA TGGGCACGCT CGCGTACTGG GCGTCGAACC CCGATCGTTC TCCGGTGGCC CTGATCGCGC TTGGCGCGGT TGGCGTGGCG GCCCTGACGA TGGACTTCCG CCTGCGTATC GCCGTCGCGC TGGTCACGGC GCTGGTGCTG GCCATCTCCC GCCGCGGGGG CTGGCTCGAG CATTGGCCGG GTGGCCGCGT CACCGCATAC TTCGGCAAGA TCTCGTACTC GGTCTTCCTC GTGCACTTTC CGGTCTGCCT GGTAGTGAAC GCCTTGGTGT TCCATTTCGC TCCGGGCCAG CCGATGCTCA ACGCTTTGGG GATGTTGCTG GCGTGGGTCG CCAGCAACGT AGCCGGCGCT GTATTCCATC GCTATGTGGA GGCTGCCAGC CCGCTGCGCT CGGTGATCGA CTTCGTCAAG GAAGGGATTC ACACCCGCAA GTGGACGCGG GGCGAAAAGC CCCAGGCCTG A
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Protein sequence | MSPRPSRLAC VDALKAVSSQ LIVLHHLAFY GPMSDAAQSL APGLIGWLSD YARIAVQVFL VISGFLAARS LAPAGRLTAQ SPLSTVWRRY QKLVVPYTVA MLVAIIGAAI ARTWMHHDSI PAAPHLTQVI AHILLLHNIL DVDALSAGVW YIAIDLQLFA LLVFALWLAR AVSRDTLPLG VPTVAALAVA SLFWFNRDAT WDIWAIYFFG AYGMGTLAYW ASNPDRSPVA LIALGAVGVA ALTMDFRLRI AVALVTALVL AISRRGGWLE HWPGGRVTAY FGKISYSVFL VHFPVCLVVN ALVFHFAPGQ PMLNALGMLL AWVASNVAGA VFHRYVEAAS PLRSVIDFVK EGIHTRKWTR GEKPQA
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