| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4570 |
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| Symbol | upp |
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| ID | 4041431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1183201 |
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| End bp | 1183818 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637979991 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_586701 |
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| Protein GI | 94313492 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000263054 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0155857 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCGTGA ATCATCCACT GGTGCAGCAC AAGGTCACAC TCGTGCGCAA CGAGGACACC
ACCACCGACA ACTTCCGGCG CCTGGTGCGG GAGATCAGCC AGCTCCTGAC CTACGAGGCG
ACGCGCGACC TGGCGATGGA GATCATCTCG ATCCGCACGC CGATCGCGCC CATGCAGTCG
CCGGTGCTGT CCGGCAAGAA GCTCTGTCTG GTATCGATCC TCCGTGCCGG CAACGGCTTT
CTCGACGGGA TGCTGGAACT GCTGCCGGCT GCTCGCGTGG GTCATATCGG CCTGTACCGC
GACCCCGAGA CACTGGAGCC GATCGAGTAC TACTTCAAGA TGCCCGAGGA CATCGGCGAG
CGGATGGTGA TCGTCGTCGA CCCGATGCTG GCTACGGGCA ACTCGGCCAT CGCCGCATTG
AATCGTCTCA AGGAAGCGGG GGTGACCACC ATGAAGTATG TCTGCCTGAT TGCATCGCGG
CCCGGATTAC GCGCGCTGCA GGCAGCGCAC CCTGATGTCT GCATCGTCAC GGCGGCCATT
GACGAGCAAC TCAACGAGCA CGGCTATATC GTGCCCGGTC TCGGCGATGC CGGTGACCGG
CTCTACGGCA CCAAATGA
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| Protein sequence | MVVNHPLVQH KVTLVRNEDT TTDNFRRLVR EISQLLTYEA TRDLAMEIIS IRTPIAPMQS
PVLSGKKLCL VSILRAGNGF LDGMLELLPA ARVGHIGLYR DPETLEPIEY YFKMPEDIGE
RMVIVVDPML ATGNSAIAAL NRLKEAGVTT MKYVCLIASR PGLRALQAAH PDVCIVTAAI
DEQLNEHGYI VPGLGDAGDR LYGTK
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