| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4438 |
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| Symbol | |
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| ID | 4041297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1034014 |
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| End bp | 1035003 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637979860 |
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| Product | extra-cytoplasmic solute receptor |
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| Protein accession | YP_586572 |
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| Protein GI | 94313363 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000369974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.285012 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAGAC CCAACTTGAA ACGCAGACAC TTCCTTCTGG CGCCCGTCCT CGGCGCCATC
GCGCTGGGCA CCGCCACGCT GGCGCACGCC GCCTATCCCG ACCGGCCGAT CACGCTGGTC
ATCCCCTTTT CCGCCGGGGG TCCGACCGAC GTCGTGGGGC GTATCGTTGC CAGCAAGGCT
TCGGAGATCC TGGGCCAGCA GATCGTGGTC GACAACCGCG TCGGCGCGGC CGGCACGATC
GGCATGAATG CAGTGGCGCG CGCCAAGGCC GATGGCTACA CGCTCGGCCT CGCCACGGTC
AGCACGCACG GCACCGCGCC GCATCTGCTG GCCAAGCCGC CCTATGACCC GGTCAAGGAC
TTCACGCCGG TCGTCAATCT GGTCAGCAGC CCCAACATCC TCAGCGTGCA CCCCGGCTTC
CCGGCCCGCA CGCTGAAGGA GTTCGTGGAT TACACGAAGA AGCACCCCGG CAAGGAAAGC
TACGCCAACG CCGGTGCCGG AGGCATCAAC GACCTCGGCA TGGCCTGGTT CCTGCAACTC
AACGACGCGA ACATGATCAG CGTGCCCTAC AAGGGCTCGG CGCCGGCGCT CAACGATGCA
ATCGGCGGCA ACGTCAAGGT CATCTTCGAC AACTTCCCGT CGTCCCTGCC ATTCATCAAG
GCGGGCAAGC TGCGCGCGCT CGCCATCACC GGCACGCAAC GCAACGACAA GCTGCCCGAC
GTCCCGACCT TCGCCGAGCA GGGCTACAAG GACTATGACG TCAGCGCCTG GTATGGCGTG
GTAGCGCCGG CAAAGTTGCC GCCGGAGGTT CGCACCCGCC TGGTGGAGGC CTTCCAGGCG
GCGCTGGCCG ATGCCAACAC GCGGCAGCGC CTTGTCGATG CCGGCGCCTT CCCGGTCTCG
GTCGGGCCGG ATGCCTTTGC CCGCCAGATC CGTCAGGAAT ACGAGCGTTG GGGCACGGTG
ATCCGCAAGG CTGGCATCAC GCCGCAGTAA
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| Protein sequence | MRRPNLKRRH FLLAPVLGAI ALGTATLAHA AYPDRPITLV IPFSAGGPTD VVGRIVASKA
SEILGQQIVV DNRVGAAGTI GMNAVARAKA DGYTLGLATV STHGTAPHLL AKPPYDPVKD
FTPVVNLVSS PNILSVHPGF PARTLKEFVD YTKKHPGKES YANAGAGGIN DLGMAWFLQL
NDANMISVPY KGSAPALNDA IGGNVKVIFD NFPSSLPFIK AGKLRALAIT GTQRNDKLPD
VPTFAEQGYK DYDVSAWYGV VAPAKLPPEV RTRLVEAFQA ALADANTRQR LVDAGAFPVS
VGPDAFARQI RQEYERWGTV IRKAGITPQ
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