| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4404 |
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| Symbol | shcR |
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| ID | 4041262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 1000700 |
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| End bp | 1001299 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637979825 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_586538 |
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| Protein GI | 94313329 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0114676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.191291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTATCTT CCGGGTCCAT GAGTGAAGCC CACCGCCGCC CCAAACAACC GCTCCTGATA
CGCGACCGCC TGCTCTCCGC CACAATCGAC CTGCTGGTCG AGGAAGGCAT CGGCGCCGTC
ACCCTTAACT CTGTCGCCAC ACGCGCCGGT GTGTCGAAGG GTGGCCTTCA GCATCACTTC
TCAAGCAAGG AGGAACTGCT GGAAGCCCTG TCTGCCAAGG TGCTCCAGCA TTTCACCGGC
CAGGTTGCCA CGCTGGCCGA ATCCGATACC GATGCCCAGG GACGCAATAC ACGGGCCTAT
CTGCGCGCCT CCGCCGATGG TTTCGCCGAA TCCGGCGAAC GCGAGCTGTG GAAGGCCGCG
ATGATGCTCA TCATGGCGCG TCCCGAGTTC CGCACGCCCT ACCAGGAATG GGAATCCGGC
AGCCTGAATA CGGACCTCGC GCAATGCGAG GACCCCATCG GCCTGCTCCT GTGCCGGCTG
GCGGCTGACG GGCTCTGGCT GGCCGATCTT CTTGGCCATC GCGCCATTCC CCCGGCTCAA
CGGGCTGAGC TGGTTCGCCG GCTCGAGCAA TTAACGCACT GCCGTCCTCA ACAAGCATGA
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| Protein sequence | MVSSGSMSEA HRRPKQPLLI RDRLLSATID LLVEEGIGAV TLNSVATRAG VSKGGLQHHF
SSKEELLEAL SAKVLQHFTG QVATLAESDT DAQGRNTRAY LRASADGFAE SGERELWKAA
MMLIMARPEF RTPYQEWESG SLNTDLAQCE DPIGLLLCRL AADGLWLADL LGHRAIPPAQ
RAELVRRLEQ LTHCRPQQA
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