Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4397 |
Symbol | potI |
ID | 4041255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 993762 |
End bp | 994544 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637979818 |
Product | binding-protein-dependent transport systems inner membrane protein |
Protein accession | YP_586531 |
Protein GI | 94313322 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.814917 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.279187 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGCC CCCGTTGGCC TGTGTGGGTG GCCTGCCTGG GCTGCGCGGT CTATGCGTTC CTGTACCTGC CGTTGCTGAT CGTCGTGGCC TACTCGTTCA ATGACTCACG CCTGAACGCG GAATGGGACG GCTTCACGCT GCACTGGTAT GACGTGCTGG CAAGCGATCC GGACATGCTG GGTGCGGCGT GGAACTCGTT GATGATCGGC GCGATCGCGG CAGGCACGTC ATGCGTGCTC GGCACGCTCG CCGCCATCGC GCTGCACCGC TACCGGCCGC CATTGCTGGC TACGCTGGTG CTCGCGCCGA TCGCGATGCC CGAGGTACTG ATGGGGGTGT CGCTGCTGTT GTTCTTTGTT GCCGTGAATA TCGATCTCGG CCTGACAGCC GTGGCGCTGT CGCATATCAC GTTCTGCGTG GGCTTCGTTG CCGTGGTGGT GCGTGCCCGG CTCGAAGGGC TCGACGAGAG CCTGATCGAC GCCGCCCGCG ATCTCGGCGC CTCACCGCTT CAGGCCGGGT GGCATGTCAT GCTGCCGCTG ATGCTGCCGG GCGTCCTCGC GGGCGCGTTG CTGGCCTTCA CCCTGTCGAT GGACGACTTC GTCGTGACCT TCTTCACGGC GGGGCCCGGC CAACCGACAC TGCCGCTGCA GATTTACTCG ATGATCCGGA TCGCGGTCAC GCCGGAAGTG AATGCGATCT CGTCCATCCT CATGATGCTG ACACTGGCCG TGTCGCTCAC GGCCTATCGC GTTTCGCGCG ACGTCTGGAG GGCGCAACTA TGA
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Protein sequence | MNRPRWPVWV ACLGCAVYAF LYLPLLIVVA YSFNDSRLNA EWDGFTLHWY DVLASDPDML GAAWNSLMIG AIAAGTSCVL GTLAAIALHR YRPPLLATLV LAPIAMPEVL MGVSLLLFFV AVNIDLGLTA VALSHITFCV GFVAVVVRAR LEGLDESLID AARDLGASPL QAGWHVMLPL MLPGVLAGAL LAFTLSMDDF VVTFFTAGPG QPTLPLQIYS MIRIAVTPEV NAISSILMML TLAVSLTAYR VSRDVWRAQL
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