| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4386 |
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| Symbol | |
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| ID | 4041244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 982574 |
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| End bp | 984934 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637979807 |
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| Product | lipoprotein transmembrane |
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| Protein accession | YP_586520 |
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| Protein GI | 94313311 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4258] Predicted exporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.127353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.409533 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGGCG GGCTGACCCG CCGCGAGCGC CTGCTGGCGA TTGGCTGGCT GCTGCTCGTG
ATTGCGCTGA TCGCGCACCA GGTGCAGTTC TGGCGTGCAT CGCGGCTCGA CACCGACGTG
ATGGCGCTGC TGCCGACCAG CGAGCGCACC GCCACGGCCG ATCGCGTGCT GCGGCAGCTG
ACCGACGGTG TGTCGCGCGA GATCGTCGTG TTGGTGGGGG GCTCGGACTG GGCCCGCACG
CGCGCGGCGG CGCAGCGCTT CTCGCAGGCC ACGTCCGGCG GCAGCGCGTT GCTGAAGCCC
GTCGACAAGA TTGCCGCGTT CGATTTCGAT GCGGCGCTGG CGTTCTACCG GCCGTGGCGC
GACGGGCTTC TGACCGACGC GCAGCGCGAG GCATTGCGCA CGACCAATGC CGATACGCTC
GCGCAGCAGG CGCTGACGCG GCTCTACCAG TTTTCCACCG GACCGCGCCT GACCGATTGG
GCGTCCGACC CGCTCGGGCT GTGGCAGAAC TGGTGGCTGT CTCGCGCGGC GGTGACCCGC
GTACATGAGC GCGATGGTCT GGCAACGGTG ACCGGCGAAG GCAAGGATTG GGTGCTGTTG
ACCTATCGGA TCACCAAGCC CGCGTTTTCC GCCAATGGCA GCACCGACTA CGGCGACCTG
CTCCACGCGG CGGAAGCGGC GGCGCGTCAG GGCGACGACG GCGTGCGCGT GGTGACGGCC
GGCATCCCGC TGCACGCCGA AGCCGCGGCC GCGCAGGCCA ATTGGGAAAT GAACGTGATC
GGATGGGGTT CGCTGGCCGC GGTGCTGCTG CTGGTGTGGC TGGCCTTCCG TTCGCTGCGG
CCCATCGTGC TGGTGGGGCT GTCACTGCTG ATCGGGACGG CGGCAGCAAT CTCCGCCACG
GCGATCGTCT TCGACCGCGT CCACCTGATC ACGCTGGTGT TCGGCGCCAG TCTGGTCGGG
GTGGCCGAGG ATTTCGGCAT CCACTACTTC GTGACGCGCC AGGCCATGCC ACGCGCGACA
CCGCCTGCCG TGATGCGCTT CCTGGCGCCC GGACTGGCGC TGGCGTTGTC TACGAGCGTA
GTGGCCTATC TCGCGCTTGG CATCGCACCG TTCCCCGGGC TGCGCCAGAT GGCGCTGTTT
TCCGCGGTTG GCCTGATCAC GGCCTTCCTG ACCGTGCTGT TCTGGTTCCC TTTGCTCGAT
CGGGGCAACC TGCGTCCGAC GCGTCTTTCC ACCTGGCTTG CCGATAGCCT GGCGCGCTGG
CCGTACGCAC GCAATGACCG GCGTACCTGG CTGGCGCTTG GCGTGTTGAT GCTGTTCATC
GTGACCGGCA TCTGGCAGGT GCGCGTTGCC GACGACATCC GGCAACTGCA GAGTTCGCCG
CCCGCGCTGA TCGAGGCGCA ACGCACGGCA GGGCAGTTGC TGGGCACGCC AAGCCCGGCG
CAGTTCATCC TCGTGCGTGG CGCAACGCCG GACGAGGTGC TCGCGCGCGA GGAGGCGATC
AAGGCCGGGT TGGCCGATGC GATCCGGCGC GGCGATCTGG CCGGCTTCAT TGCGATCTCG
GACTGGGTGC CGTCCGCCGG CCGTCAGCAA GCCGATGCCG CGCTGGCCGA TCGGCAGGAG
GCGGCGATCC GCGCACGCGT GGCCAGCGCA GTGGGCGGCT CGATCGCGCC GCCCGCTCCG
TCCGCGCGTG CTGGTGACGC CGTGCTGACG CTGCCCGCGT GGCTGGCGAA TCCGGTATCG
GAAACGCCGC GGCACCTGTG GCTTGGCCGC GAGGGCAATG GTTTCGCCAG CGTGATGCTG
TTGCGCGGCC TGGACCACGT GTCGGCGATT GACGGTATCG CGGCGTCGGT GCGGCAGGTG
CCCGGCGCGG AGTGGGTCGA TCGCGTGGCC GATATCTCGT TCCTGCTCCA TCACTACCGG
GTATTGATGA GCTGGTTCCT GCTGGCAGGC GCCGTGGGCG TGGCACTGCT GCTCTGGTGG
CGTTATGGCC GCTCGGGCTG GCGCGCCCTC GTGCCGACGC TGCTGGCGGC GGCGTTCAGT
GTGGCCGTGC TGGGCTGGAC CGGCGTGCCA CTGCAATTGT TCTCGGTGCT CGCGCTGGCG
CTGCTGCTGG GTGTGGGCGT CGACTATGGA ATTTTCCTGC TCGAACACCC GGGCGATGGC
GTGTCCTGGA CCGCCATCGT GCTCGGGGCG GCCAGCACGT TGCTGGCCTT CGGGCTGCTT
GCGTTGTCGT CGACTCCCGC GCTTCATGCG TTCGGGGCGA CGATGCTGTC GGGCGTGGGT
GCGGTCTGGG TGATGTCGCC GTGGTTCAGG CCGCTGCCCG GAACGTCATC GCATCAAATC
AGTCAGGAAG GATCTCAATG A
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| Protein sequence | MQGGLTRRER LLAIGWLLLV IALIAHQVQF WRASRLDTDV MALLPTSERT ATADRVLRQL
TDGVSREIVV LVGGSDWART RAAAQRFSQA TSGGSALLKP VDKIAAFDFD AALAFYRPWR
DGLLTDAQRE ALRTTNADTL AQQALTRLYQ FSTGPRLTDW ASDPLGLWQN WWLSRAAVTR
VHERDGLATV TGEGKDWVLL TYRITKPAFS ANGSTDYGDL LHAAEAAARQ GDDGVRVVTA
GIPLHAEAAA AQANWEMNVI GWGSLAAVLL LVWLAFRSLR PIVLVGLSLL IGTAAAISAT
AIVFDRVHLI TLVFGASLVG VAEDFGIHYF VTRQAMPRAT PPAVMRFLAP GLALALSTSV
VAYLALGIAP FPGLRQMALF SAVGLITAFL TVLFWFPLLD RGNLRPTRLS TWLADSLARW
PYARNDRRTW LALGVLMLFI VTGIWQVRVA DDIRQLQSSP PALIEAQRTA GQLLGTPSPA
QFILVRGATP DEVLAREEAI KAGLADAIRR GDLAGFIAIS DWVPSAGRQQ ADAALADRQE
AAIRARVASA VGGSIAPPAP SARAGDAVLT LPAWLANPVS ETPRHLWLGR EGNGFASVML
LRGLDHVSAI DGIAASVRQV PGAEWVDRVA DISFLLHHYR VLMSWFLLAG AVGVALLLWW
RYGRSGWRAL VPTLLAAAFS VAVLGWTGVP LQLFSVLALA LLLGVGVDYG IFLLEHPGDG
VSWTAIVLGA ASTLLAFGLL ALSSTPALHA FGATMLSGVG AVWVMSPWFR PLPGTSSHQI
SQEGSQ
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