| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4381 |
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| Symbol | |
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| ID | 4041239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 978084 |
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| End bp | 979757 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637979802 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_586515 |
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| Protein GI | 94313306 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.432872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.130495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGACC GTCCGAACGG CGTCAGTGCA ACGATGGCGG CGCTGGTTGC CCGAGACGGT
GCTCGCGCCT TGGTCGCGCG GGCAACGGCA TGGCGACACG CGTTCCTGGC GGCGCCCGGC
GCGCGCTGGG CATTGTTCGT CGACAGCCCG GCCGAGTTTG CCGCTGCGCT GTTCGGCGCC
TGGCACGCGG GCAAGCATGT GGTGCTGCCC GGCGATGCGA GGCGCGATAC GCTTGCCGCG
CTGCGCGAGC AGGTCGATGG CATGGCCGGC GATCTTCCGC AGGGCCTGCA ACCGTCTGCC
ACGGAGTCTC CGCTGCAATG GCCCCGCCTG GACGCGCGAG AAACCTGGAT CACGTTGTTC
ACGTCCGGCT CCACCGGTGC GCCGGAGGCG GCGCCCAAGC GGCTGGCGCA GTTGGAGGCC
GAGGTCCATG CGCTCGAACA GGCGTTTGGT CCGACGATGC CGCGAGAAAA CCGTTTGTTG
ACTACGGTTT CGCATCAACA TATCTACGGC CTGCTGTTCA CGGTCCTGTG GCCGCTGGCG
GTGGGCCGGT CGATGCCGGT GGCACGCATG GCGTTCCACG AGGAGTTGGT CGCGGCCTGT
GCCGAAGACC GGACACCGGT GGTCCTGGTC AGCAGCCCGG CGCATCTGAA GCGGATGCCG
GAAGCGCTGG ACTGGGCCGC CACGCGCGGC GTGGTGCGGG CGGTGTTTTC GTCTGGTGGT
CCGTTGCCGC CAGAGGGTGC GTCGGATGTG CTGCGCCATA CCGGTGTCTC GCCGATCGAA
GTATTTGGAA GTTCCGAGAC CGGTGGCGTC GCGTGGCGTC AGCGCGCGGC AGGGGACGAC
CGCTGGACGC CGCTGCCCGG TGTGGCGTGG CGGCTGCAAG AAGGGTTCCT CGCGGTTCGC
TCGGCCCACC TCGCCGACGA TGACTGGCAG GTGTGCGCCG ACCGGGTGCT GCCGACTGGA
GATGGCGCAT TCGTGCTGGC CGGTCGGGCG GACCGCATCG TCAAGATCGA GGAAAAACGG
GTGTCGCTGA GCGCGATCGA GCAGCGGTTG CAGGCGTCGC CGCTGGTGCG CGAAGCCCGC
GTATTGCTGA TCGAGACCGC TATCGGCACG CGCGTGGGCG CGGCCATCGT GCTGCAGGAA
GCCGGCCAAT CGATGCATGA CGGCAAGGGC CGTCATGCGC TGATTGCCGC GCTGCGCCGT
GCGCTGGCCG ACGGCGTTGA CCGGCTGGCG TTGCCGCGGC GCTGGGCGTT CCCGCAGGCG
TTGCCGTGCA ACGCCCAGGG CAAGACCACC GAGGCGATGC TGCGCGAACT GCTGCGTCAC
AGTATTCCGG TGGCGCGCTG GGTGGAGGCC GACGATACGT CGGCCACGGC CGAGCTGGAC
ATCGCCGAAG ACCTCGCAAT CTTCGATGGC CACTTTCCGG GCGCACCGGT CGTGCCGGGC
GTCGCTCAGG TCGACTGGGT CATGGCGCTG GCGCCGCAAC GCCTGGCGGT CCCGCCACGT
CAACGTTTTG CCAGGCTGGA TGTGCTCAAA TTCCAGGCTG TGATGCGTCC CGGCGCAGCG
GTGCGCATGG CGCTCGACTG GCAGCCGGCG TCATGCACGC TGGCCTTTCG ACTAACCTCC
GATGCCGGCT CGCACGCGAG CGGCAAGATC GTTTTTCACC CCGCAGTTTC ATGA
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| Protein sequence | MDDRPNGVSA TMAALVARDG ARALVARATA WRHAFLAAPG ARWALFVDSP AEFAAALFGA
WHAGKHVVLP GDARRDTLAA LREQVDGMAG DLPQGLQPSA TESPLQWPRL DARETWITLF
TSGSTGAPEA APKRLAQLEA EVHALEQAFG PTMPRENRLL TTVSHQHIYG LLFTVLWPLA
VGRSMPVARM AFHEELVAAC AEDRTPVVLV SSPAHLKRMP EALDWAATRG VVRAVFSSGG
PLPPEGASDV LRHTGVSPIE VFGSSETGGV AWRQRAAGDD RWTPLPGVAW RLQEGFLAVR
SAHLADDDWQ VCADRVLPTG DGAFVLAGRA DRIVKIEEKR VSLSAIEQRL QASPLVREAR
VLLIETAIGT RVGAAIVLQE AGQSMHDGKG RHALIAALRR ALADGVDRLA LPRRWAFPQA
LPCNAQGKTT EAMLRELLRH SIPVARWVEA DDTSATAELD IAEDLAIFDG HFPGAPVVPG
VAQVDWVMAL APQRLAVPPR QRFARLDVLK FQAVMRPGAA VRMALDWQPA SCTLAFRLTS
DAGSHASGKI VFHPAVS
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