| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4371 |
|---|
| Symbol | |
|---|
| ID | 4041229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 969603 |
|---|
| End bp | 970634 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637979792 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_586505 |
|---|
| Protein GI | 94313296 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.287602 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGCAAG TGCTGTCATC GTCAACCCAA ACCCGCCCCG CCCGTGCATC CGCACCCGGC
GAGACGGCCT CCAATCGCCG ACGCGCCGGC GCCACACTTT CCCGTTTGGC CGGAGCGATA
AGTCATGCCA GCCGACGTCT GAGCTGGCAG GCCGGCAGCC TGATTTTCCC CGTGGCGACA
TCCCGGGCGC TGGAGCGCCT GTGGTTCAGC CCACCCCGCG CGCGATCCAC GCCCGACGGT
CTGCGCTTGC TCGACAGCGC CCGCGCAGAA TGGGCACTGG TCACCGGCCA GGGCGCCAGC
CGGCGCGTGC GCGTCTATCG CTGGGGCAGC AAGGGACCCG TGGTTCTGCT TGCGCACGGC
TGGGGCGGCG AAGCCGGCCA GTGGCACGCC GTGGTCAGCG GCTTGCTGGC GGCGGGTATG
CGCGTGGTGG CATTTGACGC GCTATCGCAT GGAGCCTCGG ACGCAGGCGC GCGCGGGCAG
GATCAAAGCT CGATTATCGA GATGGCCCGA TCGCTGCTGG CCGTTGCCTG GCACGTCGGC
CCGGTCCATG CGGTGGTAGC CCACTCAATG GGCGGCGCGG CCACGGCCCA TGCAATCCGC
GAAGGCTTGC CCGTGCGCGG CGTGGTCATG CTCGGCTCTC CCGCCGACAT GCACAGCGCC
TGCTCCACCC TCGCCTGGCA ACTTGGCGTG GCGCCACACG TGCAGGCCCG CATGGAGCGT
CGCAGCGAAC AGTGGCTGGG CACGCAGTGG TCCACGTTCA ACGTGCCCGA CGTGGGACGC
ACGCGACCGG TACCACCCGC GCTGGTGATT CATGATCGCG AGGACAAGGA AGTCCGTTGG
GAGGACGGTG CGGCAATCGC AGGCGCATGG CCAGCCGCGC GGCTGGTAAC AACCCAGGGC
CTCGGGCATC GCCGGATCCT GCGTGACGCT ACCGTGATTG GCCACATTGC CGGCTTCGTG
AACGATCTGC AGGCGATACC ACCCGTGCAT CGCATGACAA GCGCGCGGAC GTCGCCGGCG
ACCACCATCT GA
|
|---|
| Protein sequence | MSQVLSSSTQ TRPARASAPG ETASNRRRAG ATLSRLAGAI SHASRRLSWQ AGSLIFPVAT
SRALERLWFS PPRARSTPDG LRLLDSARAE WALVTGQGAS RRVRVYRWGS KGPVVLLAHG
WGGEAGQWHA VVSGLLAAGM RVVAFDALSH GASDAGARGQ DQSSIIEMAR SLLAVAWHVG
PVHAVVAHSM GGAATAHAIR EGLPVRGVVM LGSPADMHSA CSTLAWQLGV APHVQARMER
RSEQWLGTQW STFNVPDVGR TRPVPPALVI HDREDKEVRW EDGAAIAGAW PAARLVTTQG
LGHRRILRDA TVIGHIAGFV NDLQAIPPVH RMTSARTSPA TTI
|
|---|
| |