| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4306 |
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| Symbol | |
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| ID | 4041164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 900601 |
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| End bp | 901842 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637979728 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_586441 |
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| Protein GI | 94313232 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0575629 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAGA ACACAGTCAC CACGCCAGTG CCAGACACCA CGGATCGTGC GCTCGATGCG
CGTGCGCTCC ACGCGGCGCT GGCCGGACTC TGCGCAAGCC TTGTCGCCAT AGGTCTTGCC
CGCTTTGCCT ATACGCCGTT GATTCCCTCG TTGATCCAGG CCCACTGGTT CAGCGCCGCA
GACACGGTGG CACTCGGCGC CGCTAACTTC GCCGGATATC TCGCTGGCGC TGTGATCGGC
CGCCCGCTGG CGACCCGGCT GTCGAACCGC CATGCTTTAC GTCTGCTGAT GGTGCTGGCC
ACCGCGGCAT TCTTTGCGTG CGCAGTACCC GTGTCGGTAA GCTGGTTCTT CCTCTGGCGT
TTTCTTTCTG GCTTGACGGG CGGCGCCATC ATGGTGCTCG TGGCTACTGC GATCCTGCCG
CATATTCCGC CGGGCCGGCG TGCATTCGTT AGCGGGATGA TCTTCCTGGG GCTTGGACTC
GGTATTGCAG CATCGGGCAC GCTGGTACCA GAGTTGCTCA AGCTTGGGCT GGGACAGACG
TGGCTCGGAC TTGGTGCCGT GTCATTGCTT CTGACTGCTA TTAGCTGGAA GGGTTGGCCC
ACCGCCGATG TGCCTACCGG CATGCCGGCA CCAACTGCGG CAGGTCACCG CCCCGTCGAC
CATGCACAGG GTTCCAGCAA TCCAGCATTG CGCGTGCTGT ACTTCCAGTA CGCTGCCAAC
GCGCTGGGAT TGGTGCCAGC CATGATGCTG TTGGTCGACT ACGTCGCGCG CGGTCTTGGC
CAGGGTGCAT CGGCCGGCGC CGGGTACTGG GTACTCTATG GCGTCGCAGC TATCGCAGGA
CCGCTGCTTG CGGGCGCCAT AGGTGGCAAG CTCGGGTTCA GGAACGCCTA TCGGCTTGCG
ATGTTGCTGC AAGGCCTGGC CGTGGGGTTG CTGGCCGTCT CCCACCACAC GGTAGCCCTG
TGGCTGTCGA CCATCGTCCT AGGCACGTTC ACCCCGGGCA TTGTCCCGCT TGTCTTGGGC
CGAGTGCAGG AGATGTTGCC CCACGACGCC ACGGCCCAGC GCGCCGCATG GAGCCGCGCC
ACCATAGCGT TCGCGCTGTG TCAGGCGCTG GGGGGTTACG GCTATGCGTA TCTGTTCGCG
CAATCGCATG AGAACTACAG CCTGATCTTC CTGTGCGGCG CAGTGGCCAT GGCAGTAGCA
TTTGTCACCG ACTTCGCCGT ACGGAAACCG AAGACCGACT GA
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| Protein sequence | MSQNTVTTPV PDTTDRALDA RALHAALAGL CASLVAIGLA RFAYTPLIPS LIQAHWFSAA
DTVALGAANF AGYLAGAVIG RPLATRLSNR HALRLLMVLA TAAFFACAVP VSVSWFFLWR
FLSGLTGGAI MVLVATAILP HIPPGRRAFV SGMIFLGLGL GIAASGTLVP ELLKLGLGQT
WLGLGAVSLL LTAISWKGWP TADVPTGMPA PTAAGHRPVD HAQGSSNPAL RVLYFQYAAN
ALGLVPAMML LVDYVARGLG QGASAGAGYW VLYGVAAIAG PLLAGAIGGK LGFRNAYRLA
MLLQGLAVGL LAVSHHTVAL WLSTIVLGTF TPGIVPLVLG RVQEMLPHDA TAQRAAWSRA
TIAFALCQAL GGYGYAYLFA QSHENYSLIF LCGAVAMAVA FVTDFAVRKP KTD
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