| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4302 |
|---|
| Symbol | |
|---|
| ID | 4041160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 896761 |
|---|
| End bp | 897399 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637979724 |
|---|
| Product | ferredoxin |
|---|
| Protein accession | YP_586437 |
|---|
| Protein GI | 94313228 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1152] CO dehydrogenase/acetyl-CoA synthase alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0232293 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00591576 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGATAAGTC TGAGCATCGA AGGAAAACAG GTCGAAGCGC CGCCAAACTG CTCCATCCTG
CAGGCCTTCC TGCATGCAGG GGAAACGTTG GTGGAGGGCG TTGGCTGCAT GGGCCAGGGG
GTATGCGGAT CCTGCCGCGT CCTGGTCCGG CGGGCCGGCA AGCAGGAAGT GATCACCGCA
CTCGCCTGCG AGACCTTGAT CGAGGACGGG ATGCAGGTTG CCTTTCTCGA CTTCTTCACT
TCCCCGGCAC GCCATGTCTA TCGGCTGGAA GACATCGAGG ATAGTTGGCA GGCGTTGCAG
GCGATTTCTG ACATATTCCC GGAAGCAGCC GACTGCCGTC ACTGCAGCGG GTGCGATCGC
GCATGCCCGA AGGGACTCGA TGTCCAGCGC GGCGTCAACC TCGCCGTGGA GGGCAATCTT
TCCGAGGCCG GCCACGTCTT CGACGAATGC GTCATGTGCA ACCTCTGCAC ACTGGCCTGC
CCCGAGCTCA TCCAGCCTAA CCACCTCGGC CTGTTCGTGC GACGGATGAT TGCGTCGCTG
ACGCTGCGGC CGGCGAATCT GATGCGACGG CTGCGGGAGA TCGAGCGTGG CGACATGACA
ATCGATCTCG ACGCGCCGGG CGCCCAGCCA CCACACTGA
|
|---|
| Protein sequence | MISLSIEGKQ VEAPPNCSIL QAFLHAGETL VEGVGCMGQG VCGSCRVLVR RAGKQEVITA
LACETLIEDG MQVAFLDFFT SPARHVYRLE DIEDSWQALQ AISDIFPEAA DCRHCSGCDR
ACPKGLDVQR GVNLAVEGNL SEAGHVFDEC VMCNLCTLAC PELIQPNHLG LFVRRMIASL
TLRPANLMRR LREIERGDMT IDLDAPGAQP PH
|
|---|
| |