| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4270 |
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| Symbol | pcA |
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| ID | 4041128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 861222 |
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| End bp | 862055 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637979692 |
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| Product | protocatechuate 3,4-dioxygenase subunit beta |
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| Protein accession | YP_586405 |
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| Protein GI | 94313196 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.760341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACCAGA CCAACAACCC CACGCTATCG CGAGCATTGG CCGCAATGTG CACGGATGCC
GCCGGCGCCG ACTCGGCCTT GCAGGAGAAG TTCGCAATCG CGCTTCGCCA TTTCCATGCA
ATGCTCGACG AACTGCAGCT GACCGATGTG GAGCTCTACC GCATCGCTGC CTGGCTTGGG
CAGGTGGCGC GAGACGATGA GGTGATCATG CTGTGCGACA TGATGGGCCT GACCATGCGT
TCGCTGGACC TGGCCCGCAC CGGCAGCGAA GCGACCGCAC AGAACGTGAC CGGTCCGTTC
CCGAAGGACG GCATTGCCGA AGGCCCGAAC CCCTGCCAGC TTGCCGCCGA TGACGAACCC
GGCCAACGGC TCGAATTGAG GGGGCGGGTG AGGGATGCGG TGAGCGGCCG CGTGCTGCCT
GGCGCGGAGG TTATCGTCTG GCAGCCCAAC CAACTCGGTC GCTATGAGAA CGAGGACGAC
TCACAGTCCG ACGACAACCT GCGCGGCAAG CTGCGTTGCG ATACGGAGGG CAGCTTCCGG
GTGCTCACTA TCCGGCTGGG CGGCTACATC ATCGGCCGCG AGGATACGGC GGTGGGAGTG
CTGATGAAGC GGCTTGGTCG CAACCGGCAG CGTGCGCCCC ACATCCACTA CCGCGTGCTG
CATCCGGGCT ACCAGACACT GACCTCGCAG GTCTACTTCG CCGGGGAACC AGCCAATTCG
GTCGACTGCA TCTTCTCGAC CATCGCCGAC CATATCGTCG AAGTCACCCC ACATCCCGAG
CGCGACGGTC ATCAGCTCAT CACGCTGGAC GTGGCAATGG AGCCCGTGGT CTAG
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| Protein sequence | MDQTNNPTLS RALAAMCTDA AGADSALQEK FAIALRHFHA MLDELQLTDV ELYRIAAWLG
QVARDDEVIM LCDMMGLTMR SLDLARTGSE ATAQNVTGPF PKDGIAEGPN PCQLAADDEP
GQRLELRGRV RDAVSGRVLP GAEVIVWQPN QLGRYENEDD SQSDDNLRGK LRCDTEGSFR
VLTIRLGGYI IGREDTAVGV LMKRLGRNRQ RAPHIHYRVL HPGYQTLTSQ VYFAGEPANS
VDCIFSTIAD HIVEVTPHPE RDGHQLITLD VAMEPVV
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