| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4239 |
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| Symbol | omp |
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| ID | 4041097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 824700 |
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| End bp | 825833 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637979662 |
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| Product | outer membrane porin |
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| Protein accession | YP_586375 |
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| Protein GI | 94313166 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.983201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAACGTC ACTTAACAAG TCAATCCATT CGCAATGTTT GTTTGTATAA GCCAATACCC
AATATGGAGG AGAAAGTGAA GTTGAAGAGA AAAAGCCTGG TTGTCGCCAC AGTCAGTGCT
ATGTTCGCAG CGAGCGCCCA GGCACAGAGC AGTGTGACGT TGTACGGTGT CGCCGACGCA
GGCATCGAGT ACGTCAGCCA TGCGGGTCTG GACGGCACAG GTTCCGCCTA TCGCGTTTCG
TCCGATAACA CCTCAGGGTC ACGCTGGGGT CTGCGGGGCA AGGAGGATCT GGGCGGCGGA
CTGAGTGCCG TCTTCGTGCT CGAAAGTGGC TTCAGCATTG ACACGGGTAC CATGGCACAA
GGTGGTCGAT TGTTTGGCCG CCAGGCTTTC GTTGGTATCT CCAGCCACCT GGGCCAGATC
ACACTTGGCC GCCAGAACAA TACTCTTTTT GATCTGTTTG CCGGGCTCGA TCCGCTGCGC
TACGCCACCT ACTCGCTGCT TTCGCAGGAT GCCCAGTTCG CAGGCCGTCC CGACAACAGT
GTCAAGTACA CCGGAAACTT TGGCGCGCTG ACCATCACGG GCCTGTACAG CGCAGGATAC
GATTCGAACA TCGCTAACGG CACCGAGGTT CCCGGTTCCC CACGGGTAGG CCAGGAGATG
GGCGCAGGCG CATCCTATAC GTCTGGAAAC CTTGGCATGG CGATAGCTTA TGACCAGCGC
CGTGGCACCT CGGTGCTGAA TGCGAGCGCT GTCGAGCGTC GCTACGTGGC TAGCTTGATC
TACACCACCG GCCCCTTCTC GGCCGTTGCC GGATATCGGT ACCTGCAGGG AGGCCTGACG
CCGACGACCG GCATTCGGTC AAACTTGTAC TGGGTAGGCG GTGGATACGC GATCACGCCT
GCTTTGAGGC TGAACCTTGG CGTGTACTAC ACGGATCGCC GCGATTCCCC AAGCGATTCG
GCGAGCTATG TGCTGCAGAC CCAGTACGCG TTTTCCAAGC GAACGGATCT GTATGTGAAC
GCTTCGTACA TGAACAACAA GGGCAAGTCG AACCTCGGCG TTGTCACATC GACGACGGTT
GCACCTGGTG TCAGCCAGAC CGGCATTGTG GCTGGTGTCA GACATATTTT CTGA
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| Protein sequence | MQRHLTSQSI RNVCLYKPIP NMEEKVKLKR KSLVVATVSA MFAASAQAQS SVTLYGVADA
GIEYVSHAGL DGTGSAYRVS SDNTSGSRWG LRGKEDLGGG LSAVFVLESG FSIDTGTMAQ
GGRLFGRQAF VGISSHLGQI TLGRQNNTLF DLFAGLDPLR YATYSLLSQD AQFAGRPDNS
VKYTGNFGAL TITGLYSAGY DSNIANGTEV PGSPRVGQEM GAGASYTSGN LGMAIAYDQR
RGTSVLNASA VERRYVASLI YTTGPFSAVA GYRYLQGGLT PTTGIRSNLY WVGGGYAITP
ALRLNLGVYY TDRRDSPSDS ASYVLQTQYA FSKRTDLYVN ASYMNNKGKS NLGVVTSTTV
APGVSQTGIV AGVRHIF
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