Gene Rmet_4161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4161 
SymbolpelG 
ID4041019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp742969 
End bp744339 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content61% 
IMG OID637979584 
Producthypothetical protein 
Protein accessionYP_586297 
Protein GI94313088 
COG category[S] Function unknown 
COG ID[COG4267] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.404295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.301328 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCA TCGGATTCGA ACTGCGCAAG ATGCTGCGGC GGGACAGCCT TTCGGGGCTG 
ATCGGCGCCT ATGCCTATGC CGGGGTGATC AGCTCCGGTC CGTGGGTGCT GTCGATCGTC
GGCATCCTGC TGATTGGCCT GCTGTCGGTC GGTTTCGTGA TTCCGGGCAT GCTGATCACG
CAGTTCCAGG TCTCGGTGAC GTACCTGATC GCGTGCAGCC TGATACTGAC CGGGCCGATG
CAGCTCTCGT TCACGCGCTT CACCTCGGAC CGGCTGTTCG AGCGTCGCGA TGATCTGGTG
CTGTCGAACT ATCACGCGGT GGCGTTGCTG GCCACGATGC TGGCAGGGCT GATCGGGCTG
GCGTGTGCGT TCTGGGCCTT TCCGGAGCAG TCGGTGCTGT ACCGGCTGTT GATGATCGCG
GGCTTCGTGA TCATGAGCAA CATCTGGATC GCGGCGATCT TCCTGTCCGG CATGAAGCAG
TACAAGGCCA TCGTGTGGAC CTTCCTGATC GGCTATGCCA TCACCGTGCT GGCGGCGCTG
GCAATGCGCA AGAGCGGGCT CGAAGGGCTG CTCGGCGGCT TTGTGGTCGG CCAGCTATGC
CTGCTGGTGG GCATGATCAC GCTGATCTAC CGGAACTACA CCAGCCGCCG CTTCATGTCG
TTCGAAGTCT TCCAGAAGCG CTACGCGTAT CCGAGCCTGA TCGCCATCGG CCTCTTTTAC
AACCTTGGCA TCTGGCTCGA CAAGTTCATG TTCTGGTATG CGCCGTCCAC CGGCCAGCAG
ATGATCGGGC CGCTCCATGC GTCGATCATC TACGACATTC CGGTGTTCCT GGCCTATCTG
GCGATCATTC CGGGCATGGC CGTGTTCCTG GTGCGGATCG AGACGGACTT TGTCGAGTAT
TACGACGCGT TCTACAACGC GGTGCGCGGC GGCAGCTCGC TGGAGCATAT CGAGGACATG
CGCAACACGA TGGTCCAAAC CATCCGCCTG GGCCTGTACG AGATCGTCAA GGTGCAAGCC
ATCGCGTCGC TGGTGCTGTT CGTGGTGGGC GGATGGGTGC TGCGACTGCT CGGGATTTCT
GAGCTGTATC TGCCGCTGCT CTACGTGGAC GTGATCGGCG CCAGCCTGCA GGTGGTGCTG
CTGGGCGTGC TGAACATCTA CTTCTACCTG GATCGCCGCC GCGAGGTGCT GATGCTGACC
GGCACGTTCG TCGTGCTGAA TTTCGTGCTG ACGCGCCTCA CGCTCGAGCT TGGGCCGGCC
TGGTATGGCT ATGGCTTCGC GGTATCGCTG CTGATCGTCG TAGCACTTGC GTTATATCTT
CTCGATCGTA AACTTGACCG TCTCGAGTAC GAAACCTATA TGCTCCAATA A
 
Protein sequence
MAGIGFELRK MLRRDSLSGL IGAYAYAGVI SSGPWVLSIV GILLIGLLSV GFVIPGMLIT 
QFQVSVTYLI ACSLILTGPM QLSFTRFTSD RLFERRDDLV LSNYHAVALL ATMLAGLIGL
ACAFWAFPEQ SVLYRLLMIA GFVIMSNIWI AAIFLSGMKQ YKAIVWTFLI GYAITVLAAL
AMRKSGLEGL LGGFVVGQLC LLVGMITLIY RNYTSRRFMS FEVFQKRYAY PSLIAIGLFY
NLGIWLDKFM FWYAPSTGQQ MIGPLHASII YDIPVFLAYL AIIPGMAVFL VRIETDFVEY
YDAFYNAVRG GSSLEHIEDM RNTMVQTIRL GLYEIVKVQA IASLVLFVVG GWVLRLLGIS
ELYLPLLYVD VIGASLQVVL LGVLNIYFYL DRRREVLMLT GTFVVLNFVL TRLTLELGPA
WYGYGFAVSL LIVVALALYL LDRKLDRLEY ETYMLQ