Gene Rmet_4072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4072 
Symbol 
ID4040930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp640349 
End bp640810 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content63% 
IMG OID637979496 
Producthypothetical protein 
Protein accessionYP_586209 
Protein GI94313000 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00371629 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTT CACAACCGCA ACGCCTGGGC CAGGGCTTCT ACTGGCAGGA CATCCGCGAA 
GGGCAGGTTT TCGAGACCTT CAGCCGTACC GTTACCGAGA CTGATCTGGT CAACTTCATC
TCGGTCACCG GGATGCTCGA AGCGATCTTT ATCGAAGAAG GTTACGAGGC CGGCGCCATC
AAGGGGCGTC CGGTGCCCGC CGCGCTGACG TACTCGCTGA TCGAGGGCTT CATCCTGCAG
ACGATGATCC AGGGTACCGG GCTGGCGATG CTCGAGCTGA CGCAGAAGAT CCTCGGCCCG
GTGGTGGTGG GCGACACGAT CCACGCCAGG ATCACCGTGA CTGGCATTCG TCCGACGTCG
AAGAGCGGCC GCGCCGTGGT GGATTCGTCG ATCGAGGTGT TCAACCAGCG TAACGAGCTG
GTCATGACGT ACACGGCGCG ACGCCTGCTG GCGGGCCGCT GA
 
Protein sequence
MTTSQPQRLG QGFYWQDIRE GQVFETFSRT VTETDLVNFI SVTGMLEAIF IEEGYEAGAI 
KGRPVPAALT YSLIEGFILQ TMIQGTGLAM LELTQKILGP VVVGDTIHAR ITVTGIRPTS
KSGRAVVDSS IEVFNQRNEL VMTYTARRLL AGR