| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4069 |
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| Symbol | |
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| ID | 4040927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 634644 |
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| End bp | 638024 |
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| Gene Length | 3381 bp |
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| Protein Length | 1126 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637979493 |
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| Product | acetyl-CoA carboxylase (biotin carboxylase and carboxyl transferase domains) / biotin carboxyl carrier protein |
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| Protein accession | YP_586206 |
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| Protein GI | 94312997 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG1038] Pyruvate carboxylase
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit
[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0299228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTTG ACGCACGCGC CTTACATTCT GGCTTGCATC CGGGCGGTAC TGCATCCATC
CCTCACGGAA TCGAGCCAGT GAAAAAGCTT CTGATTGCCA ACCGCGGCGA AATCGCGCTG
CGGGTTCAAC GCGCCGCGCA GGATCTCGGC ATTGCCACTG TCGCGGTGTA CGCCACCGAC
GACGCTCAAT CGCGCCATCG CCAGCTTGCC GATGAAGCCA TCGCGCTGCC CGGCAATGGT
CCGGCTACCT ATCTCGACAT CGACGCCATT CTCGGCGCGG CGCGCGCCGC TGGCTGCGAT
GCAATCCATC CCGGCTACGG CTTCCTGAGC GAGCGTGCCG ACTTCGCGCA GGCATGCGCG
GCAGCAGGTA TCACGTTCGT CGGCCCCACG CCCGAGCAGC TTGCCCTGTT CGGCGACAAG
GGCCGCGCGC TCGAGCTGGC CGCGCAGTGC GATGTCCCGG TGATGCCGGC CACCCCCGGT
GGCGCTTCGC TCGACGACGT CCGCGCATTC TTCGCGGCGC AGCAAGGCAA TGGCATCGTG
CTGAAGGCCG TGGGCGGCGG CGGTGGGCGC GGGATGCGCG TCGTCCGCGA TGCCGAAGCG
CTGGCCGAAG CCTACGCGCG CTGCCAGTCG GAGGCCCGCA GCGCCTTCGG CATCGAAGCG
ATCTATGCCG AGCGACTGGT CGAACGCGCG CGCCATATTG AAGTACAGAT CATCGGCGAT
GGGACTGAGA CAATCGCGCT CGGCGAACGC GATTGCACGC TACAGCGGCG CTTCCAGAAA
CTGGTGGAAA TCGCGCCGAG CCCGGTGCTG ACACCCGCCC TGCGCGACCG CATCGTGCAG
GCCGCCAGCA GGATCGCAAA GCACACCGGC TACCGCAGCC TGGGCACGTT CGAGTTCCTG
GTGGAGACCG ACGACGCCGG CACGCCCCAC GGCTTCGTGT TCATCGAAGC CAATCCCCGT
CTGCAGGTAG AGCACACCAT CACGGAACAG GTGACGGGTC TCGATCTCGT TGCCCTCCAG
CTTGGCCTTG CTGATGGCCG GAGCCTGCGC GACCTGGGTC TCGACCCCGC CGCGCCGCCC
ACGGCGCGCG GGTTCTCCGT TCAGCTACGC ATCAATGCCG AGGCCACCGA TGCGCAGGGC
CAGGCGCGCC CGGCGCTCGG AAGGCTCGAA CGTTTCGATC CGCCCACCGG GCCCGATGTT
CGCGTCGACA CGCACGGCTA TACCGGCTAC GCGCCGCCAG CTGGCTATGA CTCGCTGCTG
GCCAAACTGA TCGTAAGCAC TTCTTCACCC CGTTTCGAGG ACGTGGTGCG GCGCGTGCGG
CGTGCGCTCG GTGAATGCCG TGTTGACGGC GTGCCAAGCA ACCTCGACCT GCTGCGCGCC
CTGGTGGCAC GCGAAGACTT CGCGACACAG CATGTCCATA CACGTCACTT CGAGGCGATC
CTGCCGGAAC TGCTGACCGC CGCGCAACGC GTGGCGGCCA GTGACGCCGC GCGACAGGCT
TCCATCGGCA TCGCGCAGAC CGCCCCCGTG CCTGTACCGA CCGCTACTGC CGAGGCCATC
GACGAAGGAC TGGTTGCAGT GCGCGCGCCA ATGAACGGGC GCGTGGTCGA GATGCGCGTC
CAGGAAGACG ACATCGTGCA ACCGGGCCAG ATCGTGGCGA TCCTCGACGC GATGAAGATG
GAGCACACCA TCGCGGCCGA GTGCGCGGGG CGTGTGATCG ACGTGCGCGT CGGTGCCACC
GGGCAGACTG TCGAAGGGCA AATCCTGCTC GTGCTGGAGC CGGTGGCTGA CGCCGGCGTC
GCGCATCACC GCAGCGAGGC GGCAGACCCA CGCGCGATCC GCCCCGATCT GCAACGTGTG
CGCGATCGCG ATGCGTTCCT CGATGATGCC GCGCGGCCGG ACGCGGTGGC GAAACGCCAT
GCGCGCGGCC AGCGCACCGC GCGCGAGAAC GTGGCTGATC TGTGCGACGC AGGCAGTTTC
GTCGAGTACG GCGCCTATGC GGTAGCCGCG CAGGCCAGCC GACGCAGCGC CGAGGACCTG
ATCGCCAATA CGCCAGCCGA TGGCCTGATC ACCGGCACCG GCCGCATCAA CGGCACCCGA
TTCGCACCGG AGCGCGCGCG CTGCGCAGTG CTGGCGTACG ACGCCACGGT GCTGGCGGGC
ACGCAGGGCA AGCGCAATCA CATCAAGACA GATCGCATCC TGCAGGTGGC CGCCGAACAG
AAGCTGCCAA CCGTGATCTT CGCGGAAGGC GGCGGCGGAC GCCCCGGCGA TGTGGACTTT
CCTACCGTCG CTGGCCTCTA CCAACCGTCC TTCGCCGCAT TTGCCGCGCT GAGCGGCGAG
GTGCCGGTGA TCGGCATCGC CGCTGGCCGG TGCTTCGCGG GCAACGCTGC CCTGCTCGGC
TGCAGCGACG TGATCATCGC CACGCGCGAC GCGAACATCG GCATGGCCGG CCCCGCGATG
ATCGAAGGCG GCGGCCTTGG CGTGTATCGC CCGGAGGACA TCGGCCCCGC CGCCGTGCAG
TACCAGAATG GCGTGGTCGA CCTGCTTGTC GACGACGAAG CCGAGGCCGT GCGCGCCGCG
AAGCATTACC TGTCGATGTT CCAGGGCCGC ACGCAGGACT GGGAGGCGCC CGACGCCCTG
ATGCTGCGCG GCGTGGTGCC CGAGAACCGC CTGCGCGTCT ACGACACCCG TGCCGCGATC
CAGGGCATTG CCGACGTCGG CAGCGTGATC GAGTTGCGCG CGGGCTATGG CACTGGCGTG
CATACCGCGC TGGCGCGTAT CGAAGGCCGA CCCGTGGGCA TCGTCGCCAA CAACCCGCGT
CACCTGGGTG GCGCCATCGA CGTGGACGGC GCGGACAAGG CCGCGCGATT CATGCAGCTG
TGCGATACGC ATGGCCTGCC GATCGTCTCG CTGATCGACA CGCCGGGCTT TATGGTCGGC
CCGGAGATCG AAGCCCGCGC GCAAGTCCGT CATGTGTCCC GATTGTTCGT GCTGGGCGCC
AAGGTGCGCG TGCCGTTCAT GGCCGTGGTG CTGCGCAAGG GCTACGGCCT GGGTGCGATG
GCCATGGCTG CAGGCGGCTT CCGCGCGCCG GCCTTCACCA TCTCCTGGCC AACCGGCGAG
TTCGGCGGCA TGGGACTGGA AGGGGCGGTA CGTCTCGGCT TCCGCAAGGA GTTGGAAGCG
CTGCCGGCTG GCCCCGAACG CGACGCCCTC TACCAGCAGC TCGTGGCGCA GATGTACGAA
CGCGGACACG CAATCAATGC CGCAGCCGGG CTCGAGATCG ACGCGGTCAT CGATCCGGCC
GAAACGCGGC GCTGGTTGCT GGCCGGCCTC GATGCCGCCC CACGAGACGA GGCGCCCCGA
CGTTACGTGG ATGCGTGGTA G
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| Protein sequence | MQLDARALHS GLHPGGTASI PHGIEPVKKL LIANRGEIAL RVQRAAQDLG IATVAVYATD
DAQSRHRQLA DEAIALPGNG PATYLDIDAI LGAARAAGCD AIHPGYGFLS ERADFAQACA
AAGITFVGPT PEQLALFGDK GRALELAAQC DVPVMPATPG GASLDDVRAF FAAQQGNGIV
LKAVGGGGGR GMRVVRDAEA LAEAYARCQS EARSAFGIEA IYAERLVERA RHIEVQIIGD
GTETIALGER DCTLQRRFQK LVEIAPSPVL TPALRDRIVQ AASRIAKHTG YRSLGTFEFL
VETDDAGTPH GFVFIEANPR LQVEHTITEQ VTGLDLVALQ LGLADGRSLR DLGLDPAAPP
TARGFSVQLR INAEATDAQG QARPALGRLE RFDPPTGPDV RVDTHGYTGY APPAGYDSLL
AKLIVSTSSP RFEDVVRRVR RALGECRVDG VPSNLDLLRA LVAREDFATQ HVHTRHFEAI
LPELLTAAQR VAASDAARQA SIGIAQTAPV PVPTATAEAI DEGLVAVRAP MNGRVVEMRV
QEDDIVQPGQ IVAILDAMKM EHTIAAECAG RVIDVRVGAT GQTVEGQILL VLEPVADAGV
AHHRSEAADP RAIRPDLQRV RDRDAFLDDA ARPDAVAKRH ARGQRTAREN VADLCDAGSF
VEYGAYAVAA QASRRSAEDL IANTPADGLI TGTGRINGTR FAPERARCAV LAYDATVLAG
TQGKRNHIKT DRILQVAAEQ KLPTVIFAEG GGGRPGDVDF PTVAGLYQPS FAAFAALSGE
VPVIGIAAGR CFAGNAALLG CSDVIIATRD ANIGMAGPAM IEGGGLGVYR PEDIGPAAVQ
YQNGVVDLLV DDEAEAVRAA KHYLSMFQGR TQDWEAPDAL MLRGVVPENR LRVYDTRAAI
QGIADVGSVI ELRAGYGTGV HTALARIEGR PVGIVANNPR HLGGAIDVDG ADKAARFMQL
CDTHGLPIVS LIDTPGFMVG PEIEARAQVR HVSRLFVLGA KVRVPFMAVV LRKGYGLGAM
AMAAGGFRAP AFTISWPTGE FGGMGLEGAV RLGFRKELEA LPAGPERDAL YQQLVAQMYE
RGHAINAAAG LEIDAVIDPA ETRRWLLAGL DAAPRDEAPR RYVDAW
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