| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4068 |
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| Symbol | |
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| ID | 4040926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 632826 |
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| End bp | 634565 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637979492 |
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| Product | acyl-CoA synthetase |
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| Protein accession | YP_586205 |
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| Protein GI | 94312996 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0302705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGACG CAGCTTTCTT CGCAGATCTT GAAGCGCGGC ATCGCCGCAT CTGGCCCGCA
GGCCTGCCCA CCTCGCCGCA GTATCCACAC GGCGAGATCA GCCTTGGCGA GACCCTGCGG
GCATGGGCGC GCATCCAGCC TGAGCGGCCC GCGCTGATCT ACTACGGCAG CGAGATCACC
TTCGCCGAAC TCGACGACCT GAGCGAGCGC TGCGCGGAAC TGCTGCGGGG CCACGGCATC
GGCCCCGGCA ATCGCGTGGC CGTTCTACTG GGCAACTGTC CGCAGTTCCA TATCGTGTTC
TACGCGATTC TCAAGCTTGG CGCCGTCTAC GTGCCCGTGA ATCCACTGTT CAAGGAACAC
GAACTGGCCT ACGAGCTGAA CGATGCCGGT GCGACCATGG TGATCGCGCT CGACACGCTC
GTGCCGATGC TGATGACGGT GAAGCCGCAA ACCAGCGTGG AAACGGTCTT CAGCACATCG
GCCGGCGAAT TCCTGCCCGC GCATCCCACG CTGCCCGTTC CGGCTGGACT CGACGCCGCG
CCAGTGGCGC ACGCGGGCAC GATCGACCTG ATGGCGGCCA TCCAGACATG CACGGGCAAC
GTGCGCGACG TGAGCGTGGA TCTCGATGCA TTGGCCGCGC TGAACTACAC GGGTGGTACC
ACCGGTATGC CCAAGGGCTG CATGCATACC CAGCGCGACA TGATCTACAC GGCGGCCGCC
ACGCTGGCGG TCACCAGCGG GCGCGAAGAC CGGGATGCAA CGCTGCCGTC GTCCGACGTG
ATGCTGAACT TCCTGCCGAT GTTCTGGATC GCCGGCGAGA ACCTCGGATT GATCTATCCG
ATCTTCAGCG GCGCCACGCT GGTGCTGCTG GCGCGCTGGG ACCCACTCGC CGTCATGTCT
GCCGTGGACC GCTACCGCGT CAATCGCACG TTCATGGTGG TCGACAACCT TGTGGAACTG
CTGCAGCACC CCGAACTTGC GCGGCACGAC ATGCGCTCGC TGCAACATAC GCGCGTGGCA
TCGTTCATCC GCAAGCTGAC CGTGGACCTG CGCCGCCAGT GGCACGCGCT GACCGGCAGC
GTCGTGGCCG AAGGCGCCTG GGGCATGACG GAGACGCACA CGAGCGACAC CTTCACCACG
GGGATGCAGA CAGACGACAT GGACCTGCAC GGCCGGCCAG TCTTCGTCGG TCTGCCAGTG
CCGGGCACGC GTATCAAGAT CTGCGACTTC GAAACCGGCG TGACGCTGCC CGTTGGCGAG
GAGGGCGAGA TTGTCGTCAC CACGCCTTCG CTGCTCAAGG GCTATTGGGG CCGCCCCGAC
GCCAATGCGG AGGTGTTCCG GGACGGCTGG TTCAGGACAG GCGATATCGG CGCCTATGAC
GATGCGGGCT ACCTGCACTT CCTTGGACGG CGCAAGGAGA TGATCAAGGT GCGCGGCATG
AGCGTATTCC CGTCAGAGCT GGAAGTCCTG CTCGGACGTC ATGCCGCCGT ACTCGGGTCC
GCCGTGGTCG CACGTCCCGA TCGGGACAAG GGCCAGGTGC CGGTGGCATT CATCCGCCTG
CGCCCCGGGC ATGACGATGT GTCGGCCGAG GCGCTGACGG CATGGTGCCG CGAGCATATG
GCGACCTACA AGGTGCCCGA GATCCGCGTG GTGGACGAGT TGCCGATGAC GGCAACGGGC
AAGGTCAAGA AGGGGGAACT GCAGAAACAG TTCGAGCAGG ACGAACAAGA GGTGGGCTGA
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| Protein sequence | MEDAAFFADL EARHRRIWPA GLPTSPQYPH GEISLGETLR AWARIQPERP ALIYYGSEIT
FAELDDLSER CAELLRGHGI GPGNRVAVLL GNCPQFHIVF YAILKLGAVY VPVNPLFKEH
ELAYELNDAG ATMVIALDTL VPMLMTVKPQ TSVETVFSTS AGEFLPAHPT LPVPAGLDAA
PVAHAGTIDL MAAIQTCTGN VRDVSVDLDA LAALNYTGGT TGMPKGCMHT QRDMIYTAAA
TLAVTSGRED RDATLPSSDV MLNFLPMFWI AGENLGLIYP IFSGATLVLL ARWDPLAVMS
AVDRYRVNRT FMVVDNLVEL LQHPELARHD MRSLQHTRVA SFIRKLTVDL RRQWHALTGS
VVAEGAWGMT ETHTSDTFTT GMQTDDMDLH GRPVFVGLPV PGTRIKICDF ETGVTLPVGE
EGEIVVTTPS LLKGYWGRPD ANAEVFRDGW FRTGDIGAYD DAGYLHFLGR RKEMIKVRGM
SVFPSELEVL LGRHAAVLGS AVVARPDRDK GQVPVAFIRL RPGHDDVSAE ALTAWCREHM
ATYKVPEIRV VDELPMTATG KVKKGELQKQ FEQDEQEVG
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