| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3999 |
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| Symbol | |
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| ID | 4040857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 569101 |
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| End bp | 571566 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637979423 |
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| Product | putative TonB-dependent siderophore receptor |
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| Protein accession | YP_586136 |
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| Protein GI | 94312927 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0797719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCCC GAATCCTGGC GCTGCCGCGC CGCCGCTCCA CCGCTGTTCT GAAAAACACG
ATCCTGCTGG CCGCCCTGTA CGGCGCCGGC GCCCTATCGG CGATCGATGT CATCGCGCAG
GGCACGACCG CACAGACCAT GTCACCGCTT CGCACCTATG ACATTCCTGC TGGGCCGTTG
CAGGCCACGC TGAACCGCTT TGGCCGCGAA GCCGGCATCC TGCTGGCATT CACGCCCGAA
CAGGCCGCCA ACCACCAGAG TCCGGGCCTC CGAGGCCAGT ACAGTGTGCA CGACGGACTC
GATACGATCC TGCAAGGCAC CGGCCTCGCC GCATCAGCAC AGGCCAACGG CAGCTACGTG
CTGGCACGCA AAGTCACCCA TGCCGAGGGC CAGCCTGCCA CCGATGGCCA CGTGGCCGCG
CTGCCGCCCG TCACGGTCAG TGCCGATGCC GAGAACTATC GCGCGCCACC CACCACATCG
GTGCTTCGGT CGGACGTACC GTTGATGGAT ACCCCGCAGG CCGTCAATGT CGTGCCGGCG
CAGGTCATGG CCGACCAACG ACCACGCAAT CTCGACGACG CCGTCAACAA CATCAGTGGC
ATCACACAGG GCAACACGCT GGCCGGCACG ATGGACGCCA TCATGAAACG CGGCTTTGGC
AACAACCGCG ACGGCTCCAT CATGCGTAAT GGCATGCCGC TGGTACAAGG CCGCAGTCTC
AACGCTAATG CCGATAGCGT CGAGGTACTC AAGGGACCTG CGTCACTGCT CTACGGCATC
ATGGATCCAG GCGGCGTGAT CAACATCGTC AGCAAACGCC CGTCGCTGCA GCGTTCCACC
TCGCTTTCGC TGTTGGGCAC GACCTACGGG CACGGCAAGA ACGGCGCAGG CGGCACGATC
GACACCACGG GCGGCATTGG CACCACCGGA CTGGCCTACC GGCTGGTGGC CGACTACGTC
GACGAATCGT ACTGGCGCAA TTTCGGCGAG CACCGCGAGA CGTTGATCGC ACCTTCGATA
GCCTGGTATG GCCAGGATAC CCAGGTCAAT CTGTCGTACG AGTACCGCAA GTTTCTCTAT
CCATTCGATC GCGGCACGGC ACTTGATCCG CGCACGATGG AACCACTACC GATTCCAAGC
CGCCGGCGCA TCGACGATCC GCTCAATGAA ATGCATGGCG AATCGCACCT CGCGCAACTG
ACCGTCGACC ATCAGTTCCA TACGGACTGG CGGGCCCATT TCGCCTATAG CTACAACCGC
GAAGGCTATG ACGCCGGACA GTTGCGCAAT ACCAGGATTA ACCCCGTCAC CGGCGCCGTC
ACTCGCCGCA ACGATGGCAC GGACGGCGCG TTGAGCACCG ACAGCTACGG CGTGGCGTAC
GTCAGCGGCA ATTTCCGCGT CGCCGGCTTG CGCAACGAAC TGCAGATGGG CATGGACAGC
GAATACCGTC GTATCTATCG ACAGAACATG TTGCGCCAGA AGGCCACCGC ACCATTCAAT
TTCTGGAACC CGGTCTATGG CCGCGAGGTT CCATCAACCA CGATCTCAGC GAGCGACAGC
GACCAGACCG ACACCCTGCA CGCCACGTCG CTGTTCTTCC AGGACAGCCT GTACCTGACG
GACAAATGGA TCCTGGTCGG CGGCGCACGC TACCTGAGCT ACAGCCAGGT AGCCGGACGC
GGCCGACCGT TCGTCACGAA CACGAATATC TCGGACCAGA AGTGGCTGCC GCGCGCCGGC
ATCGTCTACA AATGGACGCC GGCGCTTTCC CTCTACGGTA GCTATACCCA ATCGCTGAAG
CCGAATTCGA CGATCGCACC GCTCAGCGGC GGCGCGGTGA TCGACGCGTC GATCGCCCCG
GAACAGGCCC AATCCTGGGA ACTCGGTGGC AAGGTCGATC TGGCCAGCGG GGTGAGCGGC
ACGCTGGCGC TGTTCAACAT CGACAAGCGC AACGTGCTCG TCTCGCAGTT CAACCCGACC
ACCGGACTGA CCGACTGGCG CACATCGGGG CGCGCACGAT CGAGCGGCGT GGAACTCGAC
GTAACTGGCC AGATCGGCCT GCGCTGGAAC GTGATCGCGA GCTACGCCTA TATCGACGCC
AAGACCACTG AAGACCCCAA GTACGCCGGC AACCGGCTCT GGAACGTTGC ACAGCACACG
GCCGCGTTGT CGGCGGTCTA CGACTTCGGC GAGATATTCG GGGGTGACCG CCTCCGGCTC
GGCGGTGGCG CGCACTACGT CGGCAATCGT CCCGGCGATT CGGCCAACAG TTTCTGGCTG
CCAGCCTATA CGGTGTTCGA TGCCTTCGCC ACCTACGAAA CGCGGGTCAG CGGACAAAAG
ATGCGTATGC AGCTCAACGT CAAGAACCTG TTCAACCGCG TGTACTACCC GTCGGCGGTC
AACCAGTATG CGGTCGCCGT TGGCAACCCA CGTCAGGTCA CGTTGCTGAC CACTTTCGAG
TTCTAA
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| Protein sequence | MPSRILALPR RRSTAVLKNT ILLAALYGAG ALSAIDVIAQ GTTAQTMSPL RTYDIPAGPL
QATLNRFGRE AGILLAFTPE QAANHQSPGL RGQYSVHDGL DTILQGTGLA ASAQANGSYV
LARKVTHAEG QPATDGHVAA LPPVTVSADA ENYRAPPTTS VLRSDVPLMD TPQAVNVVPA
QVMADQRPRN LDDAVNNISG ITQGNTLAGT MDAIMKRGFG NNRDGSIMRN GMPLVQGRSL
NANADSVEVL KGPASLLYGI MDPGGVINIV SKRPSLQRST SLSLLGTTYG HGKNGAGGTI
DTTGGIGTTG LAYRLVADYV DESYWRNFGE HRETLIAPSI AWYGQDTQVN LSYEYRKFLY
PFDRGTALDP RTMEPLPIPS RRRIDDPLNE MHGESHLAQL TVDHQFHTDW RAHFAYSYNR
EGYDAGQLRN TRINPVTGAV TRRNDGTDGA LSTDSYGVAY VSGNFRVAGL RNELQMGMDS
EYRRIYRQNM LRQKATAPFN FWNPVYGREV PSTTISASDS DQTDTLHATS LFFQDSLYLT
DKWILVGGAR YLSYSQVAGR GRPFVTNTNI SDQKWLPRAG IVYKWTPALS LYGSYTQSLK
PNSTIAPLSG GAVIDASIAP EQAQSWELGG KVDLASGVSG TLALFNIDKR NVLVSQFNPT
TGLTDWRTSG RARSSGVELD VTGQIGLRWN VIASYAYIDA KTTEDPKYAG NRLWNVAQHT
AALSAVYDFG EIFGGDRLRL GGGAHYVGNR PGDSANSFWL PAYTVFDAFA TYETRVSGQK
MRMQLNVKNL FNRVYYPSAV NQYAVAVGNP RQVTLLTTFE F
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