Gene Rmet_3972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3972 
Symbol 
ID4040830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp536055 
End bp536528 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content69% 
IMG OID637979396 
Productputative chemotaxis signal transduction protein CheW 
Protein accessionYP_586109 
Protein GI94312900 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000117333 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0039114 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCCTTT TCCTGCTCTT CCGCATCGGC GCCGATCGCT ACGCGCTCGA TAGCGCCGAG 
GTGGCCGAGG TCCTGCCGCT CGGCCCCGTG AAACAGATTC CCGGCGCGCC GGAGTGGGTC
TGCGGACTGA TGACCCGGCA CGGACAGCCC GTGCCCGTCA TCGACATCAC CGCGCTGGCC
ACTGGCACAC CCGCCACTGC GCGCGCCAGC ACCCGCACCG CGCTGGTGCA TTATCGGCGC
GCGCGCGACT CCGGCACCCA GCCTCGCGTG CTCGGCCTGC GGCTCGAGCA CGCCAACGAA
ACGTTGCGCT GCGATCCCGC ATCGTTCATC GATGGCGGCA TCGACCCGAC ACACGCCCGC
TACCTTGGAC CGGTGCGCCA CGATCCGCGT GGCCTGATCC AGTGGGTACA TGTCGGTGCG
CTGCTGCCCG ACGCCGTCCA CGCCATACTG TTTCCCGCAT CGTCCCCGGC ATGA
 
Protein sequence
MALFLLFRIG ADRYALDSAE VAEVLPLGPV KQIPGAPEWV CGLMTRHGQP VPVIDITALA 
TGTPATARAS TRTALVHYRR ARDSGTQPRV LGLRLEHANE TLRCDPASFI DGGIDPTHAR
YLGPVRHDPR GLIQWVHVGA LLPDAVHAIL FPASSPA