Gene Rmet_3897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3897 
Symbol 
ID4040750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp441718 
End bp442578 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content67% 
IMG OID637979316 
Producthypothetical protein 
Protein accessionYP_586034 
Protein GI94312825 
COG category[S] Function unknown 
COG ID[COG3777] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.882849 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.233489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC CTACCCTCGA ACAACTGCGC GAGTGGATCG GCCGCACCGA ATCCCGCACC 
GAAACGCTCG CCGCGGAACC GGTGCAAGGG CTGGCGGCCA CCTTCGACCT GGATGGTGAC
GCGCTCGTCA GCCAGCCGCT GCCACCGCTG TGGCACTGGC TCTATTTCCT GCCGCGCGCG
CCGCAGCACG AAATCGGCGT GGACGGACAT CCCGCGCTTG GCGGCTTCCT CCCGCCGGTA
CCGTTGCCGC GCCGCATGTG GGCCGGTAGC GAAGTGACGT TCAAACGCGG CCTGCGCGTG
GGCGAAACCG TGACGAAGAC ATCGACCATC ACCGATGTCC AGCACAAGTC TGGCCGCACC
GGCGAACTCT GGTTCGTGAC CGTCGATCAC GAGCTCAGCG TCAACGGCGA AACCGCGCTG
AACGAGCGTC ATGACATCGT CTATCGCGCC ATGCCCGAGC GCGGCCAGCC GCAACCGCCG
CGTCCGCGAC TGGCGCACAC CGCGCAGTTC GGCCGGTCAC TCAAGGCCGA TCCGGTGCTG
CTGTTCCGCT ATTCGGCGCT CACGTTCAAC GGCCACCGCA TTCACTACGA TCTCGACTAC
GTGCGCGACG TGGAGGGCTA CCCGGGCCTG ATCGTGCATG GACCGATGCA GGCGATGCTG
ATGCTTGAAC TGCTGCGGCA CGAGCGCCCC GACGCGCGCG TGAAGCGCTT CGGCTTCCGC
GGGCTTGCGC CGCTGTTCCA TCTGGATACG GTCACCGTCG GTGGCATGGA CGATGCGGAG
ACCCCCGGGA AGGTGATTCT GTGGACCGGC GACGATGCCG GCGGCCAGGC AATGGCGGGC
TGGGCGGAAG TGGAAGGTTG A
 
Protein sequence
MTTPTLEQLR EWIGRTESRT ETLAAEPVQG LAATFDLDGD ALVSQPLPPL WHWLYFLPRA 
PQHEIGVDGH PALGGFLPPV PLPRRMWAGS EVTFKRGLRV GETVTKTSTI TDVQHKSGRT
GELWFVTVDH ELSVNGETAL NERHDIVYRA MPERGQPQPP RPRLAHTAQF GRSLKADPVL
LFRYSALTFN GHRIHYDLDY VRDVEGYPGL IVHGPMQAML MLELLRHERP DARVKRFGFR
GLAPLFHLDT VTVGGMDDAE TPGKVILWTG DDAGGQAMAG WAEVEG