| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3896 |
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| Symbol | |
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| ID | 4040749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 440110 |
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| End bp | 441651 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637979315 |
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| Product | hypothetical protein |
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| Protein accession | YP_586033 |
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| Protein GI | 94312824 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.263214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGCG CGGAAAGCCT GGTGAAGACG CTGCTGGCTT GCGGCGTCGA TACCTGCTTT
GCCAACCCCG GCACCAGCGA AATGCATTTC GTGGCGGCGC TGGACCGGAT TCCCGGCATG
AAATGCGTGC TGGGCCTGTT CGAAGGCGTG GTCACTGGCG CGGCCGATGG CTACGCGCGC
ATGGCCGACA AGCCGGCCGC CACGCTGCTC CACTGCGGCC CGGGACTGGC CAACGGCCTG
GCCAACCTGC ACAACGCGCG CCGCGCGCAG ACACCGATCA TCAACATCAT CGGTGATCAG
GCCACCTATC ATCGTCCGCT CGACGCGCCG CTGACCGCGG ATACCGAAGG TTGGGCGCGC
CCCGTTTCGG TCTGGACGCG TACCGCTACC CATGCGGCGT CGGTTGGTGC CGATGCCGCC
GCGGCGGTGC AGGCCGCGAC TTCCGCGCCG GGTGGCGTGG CAAGCCTGAT CTTGCCATCG
GATGTTTGCT GGGATGCGGG TGGCAAGGTG GCCGCGCCGC TGCCGGCGCT GGCCGTGCCG
AAGGTGTCGC CCGATGCCGT GCAGAACGCC GCGCGCGTGC TGCGCAGCGG CCAGCCCACG
CTGATCGTGC TGGCGGGCAA CGCCTTGCGC ACTGGCGCCC TGGCCGATGC GCACCGGATT
GCCGCCGCCA CCGATGCGCG GCTGATCACG CCGATGTCGA ATTCGCGCGT GACGCGTGGA
CGTGGCCATC TGGCTGTTGA CCGTATTCCA TACTCCGGTG ACGTGGCACG CCAGAAGCTG
GCGGGTATCC GCAATGTGAT CCTGGTCGGC GCGCCCGCAC CGGTGACGTT CTTCGCCTAT
CCGGGCAAGT CGCCGCGTCC GTACCCCGAG GATGCTGTCA TCCACGTGCT GGCCCGGCCC
GAAGAAGATC TGGGCGAGGC ATTGGCCCGC CTGTCGGACG AATTGGGTGC GCGTAATGCT
CCGCTGCCGG CCTCGGCCCA TATCACTGCG GAGCCGGCAA AGGGTGCGGT GACATCCGAG
GCGGTGGCGC AGACGCTGAC CGCGCTGTTG CCCGACCAGG CCGTAGTGGT GGAAGAGAGT
GTGAGCTTCG GCCGCGCGTT CTATCCCGGC ACGGTCCATG CCGCGCCACA CGACTGGCTG
CAACTGACCG GCGGCGCGAT TGGCGCTGGC CTGCCGCTTG CCACGGGCGC TGCAATCGCG
GCACCGGACC GCCGCGTGGT GGCGTTGCAG GCCGATGGAT CGGGCATGTA CACGCTGCAG
TCGCTGTGGA CCATGGCGCG TGAAAAGCTT GATGTGACCA TCGTGCTGCT GGCCAATCGC
AAGTACGCGA TCCTGCTGGG CGAGCTGGCG GGTGTGGGTG CCAATCCCGG CAAGACCGCG
CTGGATATGC TCGACCTCGG CAACCCGGAT CTGGACTGGG TCAAGATGGC CAACGGTATG
GGCGTGGAAG CTGCGCGTGC GGAGAACATG GAGACGTTCG CCGACCTGTT CCGCATGGCC
AACCAGCGCA AGGGCCCGTT CCTGATCGAG CTGGTGATCT GA
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| Protein sequence | MNGAESLVKT LLACGVDTCF ANPGTSEMHF VAALDRIPGM KCVLGLFEGV VTGAADGYAR
MADKPAATLL HCGPGLANGL ANLHNARRAQ TPIINIIGDQ ATYHRPLDAP LTADTEGWAR
PVSVWTRTAT HAASVGADAA AAVQAATSAP GGVASLILPS DVCWDAGGKV AAPLPALAVP
KVSPDAVQNA ARVLRSGQPT LIVLAGNALR TGALADAHRI AAATDARLIT PMSNSRVTRG
RGHLAVDRIP YSGDVARQKL AGIRNVILVG APAPVTFFAY PGKSPRPYPE DAVIHVLARP
EEDLGEALAR LSDELGARNA PLPASAHITA EPAKGAVTSE AVAQTLTALL PDQAVVVEES
VSFGRAFYPG TVHAAPHDWL QLTGGAIGAG LPLATGAAIA APDRRVVALQ ADGSGMYTLQ
SLWTMAREKL DVTIVLLANR KYAILLGELA GVGANPGKTA LDMLDLGNPD LDWVKMANGM
GVEAARAENM ETFADLFRMA NQRKGPFLIE LVI
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