Gene Rmet_3875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3875 
Symbol 
ID4040569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp418322 
End bp419245 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content66% 
IMG OID637979294 
Productputative transcriptional regulator 
Protein accessionYP_586012 
Protein GI94312803 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.656109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.908987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCGC TGAACCTGCT CGAGTCATTT ATCCAGAGTG CCGAAACCGG CAGCTTTTCG 
GCTGCCGCGC GTCGCCTCGG GCTGACGCCG GCCGCAATCA GCAAGAACGT GGCGCGGCTG
GAGAACCATC TCGGGCTTCG GCTGTTTCAG CGCAGCACGC GCCGGCTGAC GCTGACGATG
GGCGGCGAGC AGTTCCTGCA GCAGGTATCC GATCCGTTCT CAACGCTGCG CGACGCGTTT
GCCAGCGCCG CGCAGGAGGA CGGCAAGCCC GCCGGGGTGC TGCGCGTGAG CATGGGCGTG
GCGTTCGGCC GCGAGTACCT GGTGCCGTTG CTTGGCGAAT TCCTGGCGCG TTATCCGGGC
ATCGTGCCGG ACTGGCATTT CGAGAACCGC ACCGTCGATC TGATCGCCGG TGGTTTCGAT
GCGGCCATCG GCGGCGGTAT CGAACTGACA GAAGGGGTGG TGGCGCGGGA ACTGGCGCGG
ACCTACGTGG TGGTGGCAGC GTCGCCGGCG TATATGAAAG ACCGGGCGAT GCCCCGCCAC
CCGTCGGATC TGGCCGGCTT CGACGGCATC GTGCGCCGGT CGGCTTCGAC GGGACGTCTG
CGGCATTGGA ATCTGCGCAA TCAGATAGGC GAGCAGGCGC TGGCGGAGAT GCGCACGCGC
GTGATTCTCG ACGACCCCGA GGCCATGGCC CATGCCGCCA TGAGCGGCCT CGGCATTGCG
CTGCTGCCGA TGCCACATGC CGCGCCCTGG CTCGAGAGCG GTGCGCTGGT GCGCCTCCTG
CCAGGGTGGT ATGCCGACAA TGGGCCGATC GTGCTCTACT ATCCGAACCG CAAGCTACTG
CCGCCGAAAA CGCGCGTATT CATCGACTTC ATTGCGGAAT CGTTCCAGAA GAATGCGCTC
GCGCACCGAT TCGACGGGCG CTGA
 
Protein sequence
MEALNLLESF IQSAETGSFS AAARRLGLTP AAISKNVARL ENHLGLRLFQ RSTRRLTLTM 
GGEQFLQQVS DPFSTLRDAF ASAAQEDGKP AGVLRVSMGV AFGREYLVPL LGEFLARYPG
IVPDWHFENR TVDLIAGGFD AAIGGGIELT EGVVARELAR TYVVVAASPA YMKDRAMPRH
PSDLAGFDGI VRRSASTGRL RHWNLRNQIG EQALAEMRTR VILDDPEAMA HAAMSGLGIA
LLPMPHAAPW LESGALVRLL PGWYADNGPI VLYYPNRKLL PPKTRVFIDF IAESFQKNAL
AHRFDGR