| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3869 |
|---|
| Symbol | |
|---|
| ID | 4040563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 412577 |
|---|
| End bp | 413656 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637979288 |
|---|
| Product | putative oxidoreductase |
|---|
| Protein accession | YP_586006 |
|---|
| Protein GI | 94312797 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAC TGTTCACCCC GGTCCGCGTC GGCCGATACA CCCTGAAGAA TCATCTGGTC
ATGGCGCCGA TGACCCGTAG CCGCGCCAGC CTTGATGGCA CGCCGGGCGA ACTGGCAGCC
GAGTACTACG CGCAGCGCGC GAGTGTCGGC CTGATCGTGA CCGAAGGGAC CCAGCCTTCG
GACGACGGGC AGGGGTACCT CGCCACGCCC GGTATCTACA CCGAAGCCCA TGTCGATGGA
TGGAAGAACG TCACCGCCGC AGTACACGAG CGAGGCGGTC GGATCTTCAT CCAGCTCATG
CACGCGGGAC GCATGTCCCA CCCGGACAAC ACGCCGCATC ACCGGCAAGG TGTGGCGCCG
TCGGCCATTG CCCCCGGTGT GCCGATGTTC ACGCTGAAGG GTATGCAGGA CATTCCGGCA
CCGCGCGCGC TGACCACTGC CGAGGTACGC CAGACCGTGG ACGACTTCCG CTTCGCCGCC
CGGCAAGCGA TCGCCGCAGG CGCGGACGGC GTCGAGATCC ACGGGGCCAA TGGTTATCTG
GTCCAGCAAT TCTTCGCGCC CAACGCTAAT ACCCGCACCG ACAAATACGG CGGCTCGATT
GACAACCGCG CCCGCTTCGC CATCGAGGTG GCCACCGCAA TCGCCGGGGA AATCGGCGCG
GACCGGACGG CCATCAGACT ATCGCCCGGC ACGCCGCTGT GGGGCATCGA CGAAGGCGCC
GAAGGTCCGG CGCTCTATCG CCACCTGGTA ACGGAACTAG ACAAGCTCGG CCTGGCGTAC
CTGCACGTCA GCCTCCAGGG CAACGAGCCA CAGTTGGCCG ACATCCGCGA ACGCTGGCGC
GGCACGCTGA TCCTGAACCG GCCGGGCCGC ACCCGTGAAG CTGTTGGTGC CGACGTGGCA
TCCGGGCTTG CCGATCTGGA AGCCTATGGA CAGATGGTGC TGGCCAACCC GGACTTCGTC
ACCCGCCTGA AGCTCGGCGC GCCGATGAAC GATGCCCTTC CCAATGCGTT CTTTGGTGGC
GACGGGCGTG GGTATATCGA CTACCCGGCC CTGGCCCTGA CCGATACCGT GACGTCCTGA
|
|---|
| Protein sequence | MSALFTPVRV GRYTLKNHLV MAPMTRSRAS LDGTPGELAA EYYAQRASVG LIVTEGTQPS
DDGQGYLATP GIYTEAHVDG WKNVTAAVHE RGGRIFIQLM HAGRMSHPDN TPHHRQGVAP
SAIAPGVPMF TLKGMQDIPA PRALTTAEVR QTVDDFRFAA RQAIAAGADG VEIHGANGYL
VQQFFAPNAN TRTDKYGGSI DNRARFAIEV ATAIAGEIGA DRTAIRLSPG TPLWGIDEGA
EGPALYRHLV TELDKLGLAY LHVSLQGNEP QLADIRERWR GTLILNRPGR TREAVGADVA
SGLADLEAYG QMVLANPDFV TRLKLGAPMN DALPNAFFGG DGRGYIDYPA LALTDTVTS
|
|---|
| |