| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3867 |
|---|
| Symbol | |
|---|
| ID | 4040561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 410053 |
|---|
| End bp | 410991 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637979286 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_586004 |
|---|
| Protein GI | 94312795 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCCG GGCCCCTTTC GACTCCGATC CAATGCCCAG ACCCGGCCGC GCGTGCACCA
CTTGCATCGC ACGGCGGGCG GACCCCTCAT GCGCGGCTCT ATCCGGCCCC GCCATCGCTG
CATGGCGCCA TTGCGGCAAT CGTGTGCCGG GACACGCGCG GCTTTCCGCT GACCGACGCA
CAGCGCCTGA CCCACGTTCC CGCATCGCCG CTCGTTTGCC TGTCCTGGTT TCCCGATCCG
GGCACCGGCC TGGTGGAACG GTCATCAAAC GGCCCCCTGT GGCGCCCCTT CGGGGCCACG
GTTACCGTTT CCGGCAGCCA GTCGTCACCA CTCACGAGCT GGGCGCCGAC CACCGGACGC
GGTGGCATGG TGTGCTTTAC CGCGGATGTG GCCAAGGCAT TGTTCGATCT GGATCTGACG
GCAATTCACG ACCGTTTTCG ATGCGCGCGC GAGGTGCTTG GCGATGGCTG GCGGCCACTC
ATCGAATCCC TGAGCGATGC CGAGAGCGAC GCGGAAACAC TGGCGGCGCT CGAGCAACAT
CTCGCTCCGC GATGGCATGC GCTTCGGCAT CGGTCGTCCC CACTCGCGTC TCTGCGCCAG
ACCGGGCGGC GCTGGGTGGA GAGCCTGGCC TGGCAGGCCC GCGAATGGCA GCGGACAAGC
AGCCCGCGTC AGGTGGAACG TCGCATCAAG GCCTATAGCG GCCGGTCCTT GCGCGAGTGG
CAAGCGATCG TCCGAACCGA GGGCGCATTC TTCACGGCCC GCGATCGTTA CGAAGCCGGC
CAACCCTTCG ACTGGCCCGG GCTGGCGCTG GAGGAAGGCT TCGCGGACCA GGCCCATCTG
GTCCGCACGA CGAAACGCAT TACCGGCTTT TCTCCAACCG AGTTCACGCA GCGCTTCGTC
GAGGATGAGT CGTTCTGGCT GTACCGGTTG TGGGTCTGA
|
|---|
| Protein sequence | MSSGPLSTPI QCPDPAARAP LASHGGRTPH ARLYPAPPSL HGAIAAIVCR DTRGFPLTDA
QRLTHVPASP LVCLSWFPDP GTGLVERSSN GPLWRPFGAT VTVSGSQSSP LTSWAPTTGR
GGMVCFTADV AKALFDLDLT AIHDRFRCAR EVLGDGWRPL IESLSDAESD AETLAALEQH
LAPRWHALRH RSSPLASLRQ TGRRWVESLA WQAREWQRTS SPRQVERRIK AYSGRSLREW
QAIVRTEGAF FTARDRYEAG QPFDWPGLAL EEGFADQAHL VRTTKRITGF SPTEFTQRFV
EDESFWLYRL WV
|
|---|
| |