| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3852 |
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| Symbol | |
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| ID | 4040546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 394067 |
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| End bp | 395359 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637979271 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_585989 |
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| Protein GI | 94312780 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.332822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.575046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGATC ACAGGCGGCT CAGGGTCCTG GTGTGCGGCG CATCGGGCCT GATTGGCGCC
GTGCTGTGCA AACGTCTGGA AGCGCAGGGG CATGAGGTGA TTCGCGGTGT ACGCACGCCA
ACGTCGGCTC GTGACGTCGC CATGGATTTC GGGACCGATA CCACCATCGA GCAATGGCTT
CCGCGCGTGC AAGGCATGCA CGTCGTCATC AATGCCGTCG GCATCATCGT CGAAACCGGC
ACGAATCGCT TCGAAGCCGT CCATCACCTG GCGCCGGCGG CGTTGTTCCG CGCCTGCGCC
AAGGCCGGAG TGGGCCGCGT CATCCAGATC TCGGCGCTTG GCGCCGATCG CGGCGACACG
CCCTACTTTC GCAGCAAGCG CGGTGCAGAC GACGTGCTGC GTGCTTTGCC CGTGCAGTGG
CAGGTCCTCT ATCCATCGCT CGTGTATGCC CAGGACGGCG ACTCCGCCGC GATGTTTCGT
ACCCTGGCGA GTCTTCCGGT GATACCGGTA CCCGAACTTG GCGATGCCAG GTTTCAACCG
GTTCATATCG ACGATCTCGT GGATACCGTC GTCACTGTCA TCGTTCCGGC TATTCCCCCG
GGCCAGTGCA TTGAGGTCGT CGGCGCAAGC CGCATGTCAT ATCGGGCGAT GCTGGACACC
TATCGCCAGG GAATGCAGTT GCCAGCGCCA ATGTGGGCGA CCATTCCCGC CCCGTGCATG
ACGGTGGCCG CGTATGTGGC GCGTTGCGTG CCGGGATCGA AGCTGACCCC CGACACGTGG
CGGATGCTCC GGCGCGGGTG TCATGGCGAT GCCGCGCCGC TGACGCGCCT GCTCGGACAT
CGGCCACGCG CCATTGGCAC TTTCATCGCA CCCGGTGAAG CCGATTGCCT GCGCCATCGC
GCCGTTGGCG CATGGCGTAT GCCGATGCTG CGGATCGTGA TGGCCCTTGT CTGGTTGGCC
ACGGCACTGG TCACGCTGTT CGCCTACCCG CTTGCCGACA GCCTGGCACT GCTCGGCGCA
GTCGGATTGC ATGGCACGCC CGCCATCGTG ACGCTATATG CCGCGGTCTT CGTAGATGCG
GCCATGGCCG TCGGATGCCT GCGCTATCCG TCACGCCGGC TATGGGCGCT TCAGGCTGCG
CTTGTCGCCG GCTACTCGCT GATCATCGCC GTCGCATTGC CGCAGTTCCT CTGGCATCCG
TTCGGGCCGG TGCTCAAGAA CCTGCCGATT CTCGCCATTC TCTTCATCCT CTACGCGGAG
CAGGAATCAT GGAATACCTC GCCATCAAGG TGA
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| Protein sequence | MADHRRLRVL VCGASGLIGA VLCKRLEAQG HEVIRGVRTP TSARDVAMDF GTDTTIEQWL
PRVQGMHVVI NAVGIIVETG TNRFEAVHHL APAALFRACA KAGVGRVIQI SALGADRGDT
PYFRSKRGAD DVLRALPVQW QVLYPSLVYA QDGDSAAMFR TLASLPVIPV PELGDARFQP
VHIDDLVDTV VTVIVPAIPP GQCIEVVGAS RMSYRAMLDT YRQGMQLPAP MWATIPAPCM
TVAAYVARCV PGSKLTPDTW RMLRRGCHGD AAPLTRLLGH RPRAIGTFIA PGEADCLRHR
AVGAWRMPML RIVMALVWLA TALVTLFAYP LADSLALLGA VGLHGTPAIV TLYAAVFVDA
AMAVGCLRYP SRRLWALQAA LVAGYSLIIA VALPQFLWHP FGPVLKNLPI LAILFILYAE
QESWNTSPSR
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