| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3840 |
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| Symbol | |
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| ID | 4040534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 383852 |
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| End bp | 384868 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637979259 |
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| Product | putative diguanylate cyclase |
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| Protein accession | YP_585977 |
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| Protein GI | 94312768 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.93592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.905889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTGA TCCTTGAGCG GCTTTCGGAG TCCGTTGCCA CGGCGGAGAA TCTGGAGCAA
CTCACGAGAC CGCTGCTGGA GATGCTGGAA CTGATCACCG GCCTTGAGTC CCTGTACCTG
ACGTCGATCG ATGAAGAGGC GGGTTTGCAG TCCGTTGACT TTGTCAGGAA CGCGGGCGAA
CTTGTGATTC CCGAGGGGCT GTCCGTTCCA TGGTCCGACA CCCTCTGCAA GCGTTGCCTG
GAGGAAGGCC GCCGCTACAC GTCGAACGCG AGCGAGATCT GGGGGGATTC ACAGGCCGCG
AGGGCGCTCG GCATCGAGAC ATACGCCAGT GCCCCCATTC GCGCGAGCGA TGGGGAGATC
ATTGGTACGT TGTGCGGGGC GAGCAAGCGC AGCCAACCGC TGGGGCCGCA GGCGTTCAGC
GCCTTGAACA TCTTCTCGAA GCTGATTGGA CACCATATCG AGCGAGAACG ATTGCTTGAG
GAACTGAGGC GGTCGAACGA GTACCTCGCG AACTTCGCGT TGACCGACGC CCTGACGGGC
CTGCCCAACA GACGGGCGCT CCACGGAGAG CTTGGCAGAC TGCTGGCGCG CGCAACCAGG
GACGAATCCC ACGTCGTCGT CGGCATCATC GATCTCGATG ACTTCAAACG CATCAACGAC
TCATACGGAC ATGTGGTCGG AGACCAGTTC CTGAGCGAAT GTTCAAAGCG CCTATCCGGC
ATTGTGCGAG ACACCGACAT GCTGGCCCGC GTGGGTGGCG ACGAGTTTGC GCTGGTGGCG
CCCTGTCCGG CGTCTGCAAC GCAGGCGCAT AGCCTGGCCG ACCAATTGCA GAAGCGTGCG
TTGGCGGCGA CTCGCGGTGT CTACACGCTT GCCGACGTCA CGATCGATTA CGCTGGTGTG
AGCGCAGGTG TCGTGGCCGT CAGGCCCGTC TCCGTCGAAC AGGCGCTGGA ACTGGCGGAC
GCCGCCATGT ATCGCGAGAA GCGGCAACGC AAGCAATCTG GCCCAAACGG TGGGTGA
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| Protein sequence | MELILERLSE SVATAENLEQ LTRPLLEMLE LITGLESLYL TSIDEEAGLQ SVDFVRNAGE
LVIPEGLSVP WSDTLCKRCL EEGRRYTSNA SEIWGDSQAA RALGIETYAS APIRASDGEI
IGTLCGASKR SQPLGPQAFS ALNIFSKLIG HHIERERLLE ELRRSNEYLA NFALTDALTG
LPNRRALHGE LGRLLARATR DESHVVVGII DLDDFKRIND SYGHVVGDQF LSECSKRLSG
IVRDTDMLAR VGGDEFALVA PCPASATQAH SLADQLQKRA LAATRGVYTL ADVTIDYAGV
SAGVVAVRPV SVEQALELAD AAMYREKRQR KQSGPNGG
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