| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3812 |
|---|
| Symbol | |
|---|
| ID | 4040647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 353345 |
|---|
| End bp | 353815 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637979233 |
|---|
| Product | putative dehydratase |
|---|
| Protein accession | YP_585951 |
|---|
| Protein GI | 94312742 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2030] Acyl dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGAC ACGAACTCTG CGCCCAGCGC TATTTCGAGG ATTTCGAAGT CGGGGAGCGG
ATGAACCTGC CCTCACGGAC GATGACCGAT GCGCTGTTCG CCGCGTTTCA GCTGGCCAGC
GGCGACAACC ATCCCGTGCA CTATGACGTG GAGTACTGCC GCGCGCATGG CATGCCCCAT
ATGCTGGCGC ATGGTTTCCA GGTGCTGATC CAGACCGCAG CGGGCGCCGG CTTGTTTCCG
CATATGGTCG AGGAATCGCT GAAGGGGTTT ATCGAGCAGA GCAGCCGCTT TCTGGCGCCG
GTCTATGTCG GAGACACGCT GTATTGCAGC CTGACGGTCA GCGAGCTGAT TCCGGGCCGC
ACCACCGGCG TGCTGGTGAT GCAATCCGAG ATCCGTAACC AGAACGACGT GCGCGTCATG
GAAGGCACGC AGAAGTACCT GTTGCGCAAG CGGGTGCCGG ATGCGCGTTA G
|
|---|
| Protein sequence | MIRHELCAQR YFEDFEVGER MNLPSRTMTD ALFAAFQLAS GDNHPVHYDV EYCRAHGMPH
MLAHGFQVLI QTAAGAGLFP HMVEESLKGF IEQSSRFLAP VYVGDTLYCS LTVSELIPGR
TTGVLVMQSE IRNQNDVRVM EGTQKYLLRK RVPDAR
|
|---|
| |