| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3658 |
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| Symbol | tadC |
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| ID | 4040474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 193060 |
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| End bp | 194169 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637979081 |
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| Product | type II secretion system protein, transmembrane |
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| Protein accession | YP_585799 |
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| Protein GI | 94312590 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTGT TCACACTGAT CTCGATCAGC CTGCTTGTCG GCGCGGTGGC GATGATCCTG
CTGGCGTGGC CGCTGATGCA GCAATGGCGG CAGCGGCGCG CCGCCGCGCG CACGATCGAC
GAGGCGCTGG TGCGGCAGGC CACCCAGCGG GCCGCGGGTG CCGCCGCGCA GGCTGGCGCC
ACGCAGGCCG GTGCCGCACC GGCGACGCAA CCGGCCCAGC AGATGTCGCC ACGCGCCGCA
GCAGTAGCCG CCGCCACGGC AGCGGCCACG GCCGCGACGC AGGGTGCGAG CCCGGCGCCG
GGTGTCGCCG ACACGCGGCG CGGATCGATC GGCGCGCAGC TTGGCGGGCG CATCAGCGAA
CGCTTTAACC AGCACTGGCT CGAATCGCGC CTGGGCAAGG CCGCGGTGAG TGCCGAGGAG
CAGCAGTTGC TGGAGCAGTG CGGTTTCTAC GGCGTCAGGC CACGCGCCGT ATTCGGTGCG
TTGCGCCTGC TGGTGCCGGG CATCCTGGCG GCGCTGGCGT TCGCGTGGAA GCTCGACGTT
TCGCTAGCCG GCGCCCTGGC GTGGGCGTTT GCAGCGTTCG CAGGCGGCTT CCTGCTGGCG
AAGACCCTGT TGCGGCGGCG CGCGGCTCAA CGGCTGCGCA GCGTGGCCGA CGAGCTTCCG
ATCCTGATCG ACATGCTGCG CCTGCTGCAG GGCGTGGGAT TGTCGATCGA CCAGAGCCTG
CAAATCATCG TGACCGAGTT CGGCAGCATG CTGCAGGTGC TTGGCCCCGA GCTGCAGCGC
TCCAACCAGC AGTTCGCGTC GGGCCGCTCG CGCGAGCAGA CGCTGCTGCG CATCGGCAAG
CTGTTCGACG ATGAAGATCT GAAGGGCCTG ATCACCTTGC TGACGCAGGT GGACCGCCAC
GGCGGCGCGG TACAGGAGCC GTTGCGCCAG TTCGGCGAGC GCCTGCAGAT CGCGCGCAAG
GCGCGCATGA AGGACAAGAT CGGCAGGCTG ACGGTCAAGA TGACCGGTGT GATGGTGGTC
AGCCTGCTGC CCGTGTTGCT GATCCTGACG GCAGGCCCGG GGTTCCTGGG TGTGATGCGC
ATGTTGGCGC AGATGAATGG AGGCAGTTGA
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| Protein sequence | MDVFTLISIS LLVGAVAMIL LAWPLMQQWR QRRAAARTID EALVRQATQR AAGAAAQAGA
TQAGAAPATQ PAQQMSPRAA AVAAATAAAT AATQGASPAP GVADTRRGSI GAQLGGRISE
RFNQHWLESR LGKAAVSAEE QQLLEQCGFY GVRPRAVFGA LRLLVPGILA ALAFAWKLDV
SLAGALAWAF AAFAGGFLLA KTLLRRRAAQ RLRSVADELP ILIDMLRLLQ GVGLSIDQSL
QIIVTEFGSM LQVLGPELQR SNQQFASGRS REQTLLRIGK LFDDEDLKGL ITLLTQVDRH
GGAVQEPLRQ FGERLQIARK ARMKDKIGRL TVKMTGVMVV SLLPVLLILT AGPGFLGVMR
MLAQMNGGS
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