| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3625 |
|---|
| Symbol | |
|---|
| ID | 4040515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 161757 |
|---|
| End bp | 162707 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637979048 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_585766 |
|---|
| Protein GI | 94312557 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTGGTTGC GCCGCAAGCG CGCGCCCGTC AACGGTGTTG TCACGCTCGA CCGCCGGCAT
CTGTACATCC TGCCTACACG CGGCGGCATC GGGTTTTCGG TGCTGCTGGC CACCATGCTG
CTGACATCGC TGAACTATGC GATCAGCCTC GGCTTCGCGC TGACATTCCT GCTGGCCGGC
ATCGGCATGG GCTGCATGTG GATGGCTTAC CGCAATCTGC TCGATCTGCG CGTGTCCGCC
GGACCTGTCA CACCGGCATT CGTCGGTGAG TGCGCGATTT TCACCTTGCA CGTCGACAAC
CAGGATGCCG CCGCGCGAAT TGGCATCGAG GCACGCACGC CGCTATCCGG TGCCGATACA
GAAACGGCCG CCCTCACCCT CGACGGCGTT TCCAGTGGCA CGTTGCCGGT GCGACTCTCC
GCCATCCGGC GCGGACGACT GGTGTTGCCA CGCGTCACGC TTTCCAGCCG GTTTCCATTC
GGCCTCTTCC GCGTCTGGAG CTATGCCGAC CTGGGACTTG CCACCGTCGT CTATCCCGCG
CCGGAAGCCA GCCCGCCTCC GCTACCCCGG CACCCTCAAT CCGACGATGC CGACGACGGC
GCGGCCAGCT TCGCGGCTGA CGACGGGATC GATCAGTTGC GCAGGTACCG GCCCGGCGAT
CCATTGCATC GCATCGCCTG GAAACACAGC GCGCGCACCG GAAAATGGCT GACCCGCTCG
GGACACACAC CGCAGCAGCC GAGTTGCTGG ATCGACTGGA ATACCCTGCC GCCGGCCATG
GACACGGAAG CGCGTCTGTC CCGCCTGTGT GCCTGGGTGT TGATGGCGGG TGAGGTATCG
GAAATCGGGT TACGCCTGCC CGGCGTCGAG ATCACGCCGG GCCGCGGTTC CGCCCACGTA
CGTGCATGCC TGGAAGCCCT GGCACTCTGG CCGGAGCGGC GCGCACGATG A
|
|---|
| Protein sequence | MWLRRKRAPV NGVVTLDRRH LYILPTRGGI GFSVLLATML LTSLNYAISL GFALTFLLAG
IGMGCMWMAY RNLLDLRVSA GPVTPAFVGE CAIFTLHVDN QDAAARIGIE ARTPLSGADT
ETAALTLDGV SSGTLPVRLS AIRRGRLVLP RVTLSSRFPF GLFRVWSYAD LGLATVVYPA
PEASPPPLPR HPQSDDADDG AASFAADDGI DQLRRYRPGD PLHRIAWKHS ARTGKWLTRS
GHTPQQPSCW IDWNTLPPAM DTEARLSRLC AWVLMAGEVS EIGLRLPGVE ITPGRGSAHV
RACLEALALW PERRAR
|
|---|
| |