| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3596 |
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| Symbol | |
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| ID | 4040445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 3907656 |
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| End bp | 3909251 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637979014 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_585737 |
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| Protein GI | 94312527 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCA ACGATATCTA CAGCGCCGGC ATCGCGTCCG GCTGGAAGGT GCTCGACGCC
GCCACGTTCA CCGCGCCGCG CACGTTTGAA GCGGACGTCG CCATCGTCGG CAGCGGCGCG
GGCGGTGGCA TTGCCGCCGA AATGCTCACC GAGGCGGGAT TCAAGGTACT GCTGATCGAG
GAAGGGGCAC TGCGCACTTC GGACAGCTTC AAGGACATGG ATGAAGCGCG CGCGTATCGC
GAGCTCTACC AGGAGGCCGC CGCGCGTGCG ACGTCCGATG GCGCCATCTC GATCCTGCAG
GGGCGCTCCG TGGGCGGCAG CACCACCGTG AACTGGACGT CCAGCTTCCG CACGCCCCCG
AAAACGCTGG CCCATTGGGC CACGGAGCAC GCTGTAACCG GGCATTCCGA AGCCGAGATG
GCGCCGTGGT TCGAGAAGAT CGAAGCCCGC CTGAATATGG CGCCGTGGGC GATGGACCCG
AATCCGAACA ACACCGTGCT CAAGCGCGGT TGCGAAAAGC TCGGCTGGGA ATGGCACGTG
ATTCCGCGCA ACGTGAAAGG CTGCTGGAAC TCCGGGTACT GCGGCCTGGG CTGCCCGGTC
AACGCCAAGC AATCGATGCT GGTGTCGACG ATTCCCAACG CGCTCGCGCA CGGGGCCACG
CTCGTGCATC GGCTGCGGGT ACGCACGATC GACCATGACG GCAAGACCGT GCGCGGCCTC
ACCGGCGACG CGCTTGGCAT CGATGGCTAC ACGGCCACCG GCGTCACGGT CACCGTTCGC
GCAAAGCATG TGATCGCGGC GGGTGGCGCC ATCAATACAC CCGCGTTGCT GCTGCGTTCG
CGCGTGCCGG ACCCGCATGG GCGGATCGGC CTGCGCACGT TCATCCATCC GGTGAACCTG
ACTATTGCCG AAATGCCGGA AAAGATCGAT CCGTACTATG GCGCGCCGCA GTCGATCGCG
TCCGATTATT TCCAATGGCG CGATGGCGCA ACCGGGCCGA TGGGCTACAA GCTCGAAGTG
CCGCCGATGT TCCCGGGCAT CAGCTCGGGC GTTTTCAATG CGCTGGGCGA TGACCTGCGG
CGTCAGATGG CCGCGTTGCC GCATACCAAC GCGATGCTGG CGCTGCTGCG CGACGGCTTC
GTGCCGGAGA GCCCCGGCGG GCGCGTGCGC ATTGCCGACG ACGGTAGTCC CGTGCTGGAC
TACGACGTGA GCGACTATGT CTGGGACGGC GTGCGCCGCG CCTACCTGAG CATGGCCGAA
GCCCAGTTTG CTGCAGGTGC GAAGCGGGTA CGACCCGCTC ATCTCGACGG TCAGGACTAC
ACGAGCTGGA CCCAGGCACG CGAAGCCATC GGCCAACTGC CCCTGAAGAA ATTCCGCGCG
TTGCTTTTCA CCGCGCACCT GATGGGTGGC TGCGGCATGA GCGACGATCC CAAGCGGGGC
GTGGTGAACA GCACGGGTCG CCACCATCAG CTCGAGAATC TCTCCGTGTT TGACGGCTCG
GTGTTTCCAA CGAGTATTGG TGCGAACCCT CAGTTGTCAG TATTCGCACT CACGGCGCAG
AATGTCTCAG CCCTATCCCG GAGCATCAAG CCATGA
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| Protein sequence | MAINDIYSAG IASGWKVLDA ATFTAPRTFE ADVAIVGSGA GGGIAAEMLT EAGFKVLLIE
EGALRTSDSF KDMDEARAYR ELYQEAAARA TSDGAISILQ GRSVGGSTTV NWTSSFRTPP
KTLAHWATEH AVTGHSEAEM APWFEKIEAR LNMAPWAMDP NPNNTVLKRG CEKLGWEWHV
IPRNVKGCWN SGYCGLGCPV NAKQSMLVST IPNALAHGAT LVHRLRVRTI DHDGKTVRGL
TGDALGIDGY TATGVTVTVR AKHVIAAGGA INTPALLLRS RVPDPHGRIG LRTFIHPVNL
TIAEMPEKID PYYGAPQSIA SDYFQWRDGA TGPMGYKLEV PPMFPGISSG VFNALGDDLR
RQMAALPHTN AMLALLRDGF VPESPGGRVR IADDGSPVLD YDVSDYVWDG VRRAYLSMAE
AQFAAGAKRV RPAHLDGQDY TSWTQAREAI GQLPLKKFRA LLFTAHLMGG CGMSDDPKRG
VVNSTGRHHQ LENLSVFDGS VFPTSIGANP QLSVFALTAQ NVSALSRSIK P
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