Gene Rmet_3579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3579 
Symbol 
ID4040428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3883958 
End bp3884326 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content61% 
IMG OID637978997 
Productcalcium-binding EF-hand 
Protein accessionYP_585720 
Protein GI94312510 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.56179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTCC GTACACCTGT AGTTGGTTTG GCCGTAGCCG TAACACTGGC GCTCGCTGCT 
TTCGGGGCGA ACGCTCAGCA GACACAGCAG CCCGCAGCGC AACCGGCGAC GGGGTCCGCC
GAGGTTCCTC CGATGCCGCC AACCTCCCAG GCCAAGGCCA TGATTTCCGA GAAGTTCAAG
GCCGCGGACA CCAACCATGA CGGCAAGCTG ACCCGCGACG AGGCCAAGGC CGGCATGCCG
GAGGTCTACA AGCGCTTCTC TCAAATCGAT GTGAAGAAGA AGGGCTACGT CACCGAGCGT
CAGATCGGTG CCTACTGGCA TTCGAAGACC GCCGAGCAGA TGCAGAAGGA AAATCCCATC
TGGAACTGA
 
Protein sequence
MTVRTPVVGL AVAVTLALAA FGANAQQTQQ PAAQPATGSA EVPPMPPTSQ AKAMISEKFK 
AADTNHDGKL TRDEAKAGMP EVYKRFSQID VKKKGYVTER QIGAYWHSKT AEQMQKENPI
WN