Gene Rmet_3575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3575 
Symbol 
ID4040424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp3878196 
End bp3879623 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content67% 
IMG OID637978993 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_585716 
Protein GI94312506 
COG category[T] Signal transduction mechanisms 
COG ID[COG4564] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTCTT CCCGGCATCG GTGTTTACCC CCGGTTCAGA TGAAACTCCG CCAAAAGATA 
CTTTTGCTTG CCGTGGCGCC GCTGGCCGTT GCCATGCTCG GCATCGCGCT GGCCGTCCGT
TTCCAGGCCA CTGCGCTGGT CCGGCACGAG CGCATGCTGG TGGAGGCCGC CTACCTGCAA
AGCAAGGAAA CCGAGCTGCG CCACTACGTA GAGCTGGCGC AAAGCGCGAT CGCACCGATG
GTCAAATCCG GCCGCACGGA CGAGGCCACC CGGCAGGCCG CCATGGACGC GCTGGCCCGG
CTCGATTACG GCCGCGACGG CTATTTCTTC CTGTATGACC TGCAGGGGCG CAACCTGATG
CACCCGCGCC AGCCCGAACT CGTGGGCCAG GACCTGTGGC TGCTGCGTGA TCCCGAAGGG
GCACTGACGA TCCAGAAGCT GGTGGCTGCC GCCAAGGCGG GCGGTGGCTC GGTGCGTTAT
CTGTGGAAAA AGCCGTCCTC GCAGCAGGTG GCGCCCAAGC TGGGCTATGT GGTGGCCGTG
CCGGCCTGGA ACTGGATGCT TGGCACCGGC ATTTATCTTG ACGACGTGGA GCAGACGCTG
CGCCAGCTCG ACGCGCGCGC CGAGACCGAC ATCCGCGAAA CCATGGCCTG GATCGGCGTC
ATCGCCGCCA TCAGTATCCT GCTGGTGGCC GCCAGCGGCC TGGCGCTCAA CGTCAGCGAG
CACCGTGAGG CCGATGCCAA GCTGCGGCAG CTTGCCCAGC GTGTGGTGCA GTCGCAGGAA
GAGGAACGCG CGCGATTGTC CCGTGAGCTC CATGACGGCA TCAGCCAGTT GCTGGTGTCG
GTCAAGCTGG TGCTCGAAGC CGCGACGAAC CGCATCCGCC TGGCCCCGAC CGAGGGGGCG
TCGGTGGCGC CGATCCTTGG CATGGCGCTG AACCGGCTCG ATTCCGTATT CAATGAAGTG
CGCCGTGTGG CGCGCAACCT GCGCCCCGCC CTGCTCGACG ATCTTGGCCT GTACGCCGCG
CTTCAGCATC TGGCGCGCGA GATGCAGGCC GGCAGCACGC TGACGATCAA CGTGACGCAG
ACTGGCAAGC CGCGTTCGCT GGCCGACGAG CCGGCGACCG CGCTGTTCCG GATTGCGCAG
GAGGCGCTGA CCAATGTCGA GCGCCACGCC CATGCCACGC GCGTCGACGT GACACTCGAC
TTTGCCGACC GTGCCACGCG CCTGACGGTG CGGGATAACG GCACGGGGTT TGACGTGGCC
CGCATGCAGG TCGATCCGAG CCGCGGCATC GGCCTGCGCA ACCTGCGCGA GCGGGTAGCC
GCGCTGGGCG GAAGTTTCGA AATCCTCTCC GCTCCCACCG GCACGCTGCT CACCGCTTCT
CTGCCCACCG CTCCGCAGCC CTTTTCCCCC GAGACTTCGC AGTCATGA
 
Protein sequence
MRSSRHRCLP PVQMKLRQKI LLLAVAPLAV AMLGIALAVR FQATALVRHE RMLVEAAYLQ 
SKETELRHYV ELAQSAIAPM VKSGRTDEAT RQAAMDALAR LDYGRDGYFF LYDLQGRNLM
HPRQPELVGQ DLWLLRDPEG ALTIQKLVAA AKAGGGSVRY LWKKPSSQQV APKLGYVVAV
PAWNWMLGTG IYLDDVEQTL RQLDARAETD IRETMAWIGV IAAISILLVA ASGLALNVSE
HREADAKLRQ LAQRVVQSQE EERARLSREL HDGISQLLVS VKLVLEAATN RIRLAPTEGA
SVAPILGMAL NRLDSVFNEV RRVARNLRPA LLDDLGLYAA LQHLAREMQA GSTLTINVTQ
TGKPRSLADE PATALFRIAQ EALTNVERHA HATRVDVTLD FADRATRLTV RDNGTGFDVA
RMQVDPSRGI GLRNLRERVA ALGGSFEILS APTGTLLTAS LPTAPQPFSP ETSQS